Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03454 ATGCAAACAAGAGAAGTAACAACCGGACTCAATTACATGCTACCATCAAACACATCACCTTATCTACAAAACTATAACAACATGATTCACAATAACAACATTTCCTCATATCAACTCCAAAAGTTCTCAAACCAATTATATGGTAATTACCTAAACACCCCTCATCAACAATTTCCTGACTTCAACTATAGTCCACAATCATCATGCATAAGCAGCAACTCAACTTCTGATGAAGCAGATGAACAAAACCTTAGTCTCATCAATGAGAGGAAACATAGAAGGATGATATCAAACCGCGAATCAGCACGTCGGTCACGCATGAGGAAGCAGAAACACCTTGATGAACTTTGGTCACAAGTTCTTTGGCTGAGGAATGAAAATCACCAACTTATAGAGAAACTTAACCATGTTTCAGAGAATCATGATCAAGTTGTTCAAGAGAATGCTCAGCTTAAAGAAGAAGCTTTGGAACTTCGACAAATGATAAAAGATATGCAGATTCATAGTCCTTTAATCCCTTCTTTTAGTCCTTTGGATGATACATATCTTAGAGATGATTCTTCAAACAATTCCATCTCAAGTTCAATGGATCTTCTTGGCTGA 603 0.3682 MQTREVTTGLNYMLPSNTSPYLQNYNNMIHNNNISSYQLQKFSNQLYGNYLNTPHQQFPDFNYSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIKDMQIHSPLIPSFSPLDDTYLRDDSSNNSISSSMDLLG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03454 200 Gene3D - 88 143 - -
Mepo5g03454 200 Coils Coil 134 168 - -
Mepo5g03454 200 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Mepo5g03454 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Mepo5g03454 200 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 10 171 IPR044521 -
Mepo5g03454 200 FunFam BZIP transcription factor 88 139 - -
Mepo5g03454 200 SUPERFAMILY Leucine zipper domain 90 140 IPR046347 GO:0003700|GO:0006355
Mepo5g03454 200 CDD bZIP_plant_GBF1 91 142 IPR045314 GO:0003700|GO:0006355
Mepo5g03454 200 Pfam bZIP transcription factor 90 142 IPR004827 GO:0003700|GO:0006355
Mepo5g03454 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 151 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03454 Mepo-Chr5 42594465 42595454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03454 65 171 bZIP Transcription Factor Family AT3G30530 74.545 9.28e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo5g03454 bZIP_1 3.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03454 - - gmx:100791105 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g03454 5 42594465 42595454 Mepo3g00404 3 5498253 5499165 PCT