Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03436 ATGCAGCAAAACAAAAACACAATCCCAATCTCACTACACAACATACATGTGAAGCTACTAGCCTTCGATCTTCTAACCCTAACCCCACCAATCTCCCCAAACCACTCCTTCACCCGCAACACCATCCCCGTAACACGCGCCGAAACCGTAGGAACCATAACCCTCCGCGATCACAAACCCTTCAAATTCCTCCGTTTCGCTATCGACGACGGAACCGGCTGCATCCCTTGCATTCTCTGGCTCAATCATATGACTTCTCCTCACTTAGCTCGTCGGCGTAGTCCGCAGGATCTTTGTCTTCTTGCTGATGCTGCTGCGAGGTCGGCGGAAGTTGTGAAGGTTGGGAATGTTGCTAGGGTTAGAGGGAGGGTTACGGAGTATAAAGGAGGGGTGCAGATAACTGTTACGGATGTTGTTGGTGAGAGAGATCCGAATGTTGAGGTTTTGCATTGGGTTGAGTGTGTTCATTTGGCTAGGAATTGTTATAATCTTGTTAATGTTTCTTCTTCTGGTTCAGTAGTACCTAAATTGAATTAG 537 0.4749 MQQNKNTIPISLHNIHVKLLAFDLLTLTPPISPNHSFTRNTIPVTRAETVGTITLRDHKPFKFLRFAIDDGTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVVKVGNVARVRGRVTEYKGGVQITVTDVVGERDPNVEVLHWVECVHLARNCYNLVNVSSSGSVVPKLN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03436 178 PANTHER REPLICATION PROTEIN A-RELATED 11 170 IPR040260 -
Mepo5g03436 178 SUPERFAMILY Nucleic acid-binding proteins 34 157 IPR012340 -
Mepo5g03436 178 Pfam OB-fold nucleic acid binding domain 53 138 IPR004365 GO:0003676
Mepo5g03436 178 Gene3D - 11 165 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03436 Mepo-Chr5 42352319 42353085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03436 40 157 Core DNA Replication Machinery Family AT2G24490 27.966 2.10e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03436 K23312 - aew:130751254 199.904