Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03379 ATGCTTGCCAAGGGTGCGAATACTTCTTCAGTTGTCTCAAACATCTCGAGAAAAAGATGTTTTGATGAATTAAGCAATCAAGTAGGATTCTCCACGGACTGGAGGTATCATCCTGAAATGGTATACAAACGTTATGATCAATCGATTCACAAGACAATTCCCCCAAAAGTTGCCGTTTCCTTGACTGATTCGTTCAGACGTGACCAAATAGAAGAACATATTAGTAGTCTGAGAAAGGAATCTGATCAGGTTGGTACACCACCTTCTAAAAAGAAGAAGAATTTGTTGCACAGTGTTGCATTTGCTGTGTGTTACAATACTTTTAAAGGTGAAAATGTCTCATTCAATGGGACATATATTTCCAAGAAAAATCTTGCGAAAAGGAATAATGATGAAGTAATTGAAGAACCGTGGGTTGAATGCTATAAATGTGAAAGATGGCAGCATCAAATATGTGCACTCTACAACAAGAAAGCAGATTTGGACCGCAGTTTGGAGTATATATGTCCTTTATGCCGCTTAAAAGAAATTGATAATGGAATACCAAAGGCTGTTAACTTTGGTGCTAAGGACTTGACAAGAACTGTGCTAAGTGACCACTTAGAGAAAAGACTTTTCGAGCGTCTCATGCAAGAGAGAAAAAACTGGGAAAAAGATGAGGTAATACCGAAAACTCCGCATTTTTTAGCAGCAGAAAGTCTTTCAATTAGAGAAGTGCTATCTGTCGACAAGCAATTGAAAGTGAATAAGCAGTTTCTGGACATCATCCCAGAGGAGAATTACCCTACTGAATTCTCTTATAGATCAAGAGTTATTCTTCTGTTTCAGGAGATTGAAGGAGCAGATGTATGCATTTTTGGAATGTATGCTCAGGAGTTTGGCTCCAAATGCGGCAGTCCGAATCAGTGTTGTGTATACATATCATATCTTGATTCCGTCAAGTATTTTAGGCCTCAAAGAAGGACAAAGAGTGGAGAAGCCGTTCGTACCTTCGTTTACCATGAGATATTGATTGGATATCTTGATTTTTGTAAGGAAAGGGGTTTCTCAACTTGCTACATATGGGCCTGTGCTCCAAAAAAAGGTGATGATTATATACTATATTGCCATCCGAAAGAGCAAAAGACTCCGAAGAATCATAAGCTACGCCACTGGTATCTTTCAATGCTAAAAAAGGCTACCGAAGAAAATATTGTCGTTGGTTTAACCAACGTATATGATCATTTCTTTGTTCCTACTGAAAAAAGGAAATCCAAGGTGACAGCTTCTCGTTTGCCATACTTTGATGGAGACTGGTGGTGCGGTAATGCTATGGTAGTAGCCAAGACCCTCGAAAAAGAGAGTAGAGGAGACTATGAAAAGTTGTTGAAACAAGTGTCAAATAGAATAGTAAAGGACATGGGACATGCCAAGCCTTCCAAAGACATTCTGGTGATGCAAAAAGTTGGCCAAAATATATTGCCTACAAAAGAAAACTTCCTCGTAGCTCACTTGCGATATTCATACATGCACTGCCGTGAAGTGATAGTTTCTGGGAAACGTTGGTTTTGCACTGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATAGTTCTGAAGAACACACTTTAATGAACGGCGAGGTGCATACACTTTGTCAGGCTGTTGTTGATGATATCACCTCCGACACTAAACGTAATGATATCGTCCTTGAGAGTGAATTGTTTGAAAATAGGGACAACTTTTTGATCTTTTGCCAGAAGTCTCAGTTTCAGTTTGATACACTCCGTCGTGCCAAGTATTCCTCTATGATGATCCTCTACCATCTACACAATCCTACTGTGATGACTCAAAATGAACACCTGTTGACTCAAAAGTTTTCAACACCGGTATCTCAATCGGAGAATCAGGAGTCAAATGAGGAAATGATGGTGAAACTGATGAACGTTTTGAAGCATGCATCTCAATGCTGTCGCCGCGCAAGTAATGCTGAGCCATGCTCTCATCCAAACTGTTCTCAAATCAAGAAGCTGTTCTATCATGCCAGTAAGTGTGAAATTCGAGCTAATCGAGGCTGCCAGCATTGTAAAAAGATATGGTTTATACTGACTGCTCACTCCAGAAATTGCAAAGACTCAGAATGTAGAATACCGCGTTGCAGTGATCTGAAGAAGCATTTCGAAAAGAGATCAATGCATTATGAGTCTTGCCATAGAGATGAAGTTTTGGAAGCAGTCATTGGCCAATGA 2229 0.397 MLAKGANTSSVVSNISRKRCFDELSNQVGFSTDWRYHPEMVYKRYDQSIHKTIPPKVAVSLTDSFRRDQIEEHISSLRKESDQVGTPPSKKKKNLLHSVAFAVCYNTFKGENVSFNGTYISKKNLAKRNNDEVIEEPWVECYKCERWQHQICALYNKKADLDRSLEYICPLCRLKEIDNGIPKAVNFGAKDLTRTVLSDHLEKRLFERLMQERKNWEKDEVIPKTPHFLAAESLSIREVLSVDKQLKVNKQFLDIIPEENYPTEFSYRSRVILLFQEIEGADVCIFGMYAQEFGSKCGSPNQCCVYISYLDSVKYFRPQRRTKSGEAVRTFVYHEILIGYLDFCKERGFSTCYIWACAPKKGDDYILYCHPKEQKTPKNHKLRHWYLSMLKKATEENIVVGLTNVYDHFFVPTEKRKSKVTASRLPYFDGDWWCGNAMVVAKTLEKESRGDYEKLLKQVSNRIVKDMGHAKPSKDILVMQKVGQNILPTKENFLVAHLRYSYMHCREVIVSGKRWFCTECKKFQECERCHSSEEHTLMNGEVHTLCQAVVDDITSDTKRNDIVLESELFENRDNFLIFCQKSQFQFDTLRRAKYSSMMILYHLHNPTVMTQNEHLLTQKFSTPVSQSENQESNEEMMVKLMNVLKHASQCCRRASNAEPCSHPNCSQIKKLFYHASKCEIRANRGCQHCKKIWFILTAHSRNCKDSECRIPRCSDLKKHFEKRSMHYESCHRDEVLEAVIGQ 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03379 742 PANTHER CBP/P300-RELATED 104 725 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mepo5g03379 742 Gene3D - 498 543 IPR043145 -
Mepo5g03379 742 Pfam TAZ zinc finger 639 713 IPR000197 -
Mepo5g03379 742 SUPERFAMILY TAZ domain 636 722 IPR035898 -
Mepo5g03379 742 ProSiteProfiles Zinc finger TAZ-type profile. 630 716 IPR000197 -
Mepo5g03379 742 SMART KAT11_2 222 509 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mepo5g03379 742 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 176 IPR013083 -
Mepo5g03379 742 SMART TAZ_2 631 714 IPR000197 -
Mepo5g03379 742 SUPERFAMILY RING/U-box 477 536 - -
Mepo5g03379 742 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 186 608 IPR031162 GO:0004402
Mepo5g03379 742 Gene3D TAZ domain 625 739 IPR035898 -
Mepo5g03379 742 SUPERFAMILY FYVE/PHD zinc finger 135 175 IPR011011 -
Mepo5g03379 742 SMART PHD_3 103 173 IPR001965 -
Mepo5g03379 742 Pfam Histone acetylation protein 230 434 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03379 Mepo-Chr5 41688169 41691882 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mepo5g03379 HAT_KAT11 1.5e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03379 K04498 - psat:127094503 864.374