Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03377 ATGTTCCCTTACAGTTCAAACCCTTACCCTTCATTTCTTCCCTCATCTTCTTCTTCTTCTTCTTCTTCTACTTCTTCACTCTTTCCTTTTCCTTTCCTAAATCCTGAAAATGCTTCTTCAAACAACAACACACTTTTTCATGATCCATTTTCAATTCCTTACATACCAATTCATCATCATCCTCATCCTAATCTTCATAACATTACAAATATTCCAGAAACCCTAACCAATTTGGCTGCTTCTCAAGAAAATAACAATAATAGTAACAATAATAATAACATTGCTATTCCAATGCCTAAACAAGATCCTTCATCTCTTGGTGGTTCTTCTCACTATGGTATTTCCTGTTTTCTCACAAAGAAACCGGTGAAGAAAGACCGACACAGTAAGATTTACACTTCTCAAGGTTTGAGAGATCGAAGAGTGAGGCTTTCGATTGAGATCGCTCGAAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCTAGCAACACACTTGATTGGCTTTTCACAAAATCTAAGAAAGCAATTAAGGATCTAACTAAGAGTAAGCAAAGAAACAACACTAGTGAAGTTGGTGGTGATGCTAAAAGCTTCACATCTTCCTCAGATTGTGAAGATTCCGAAATTGCTACTAATAATTCTTCAAACCTAAAACAACATAAGGAAGGTGCAGGAAGTAAACTTGAAGAGAAGAAGTTGAAAAGAGTACAGATCAAAGAACCTGCTTGTGTTAGAGCAAGTAAGATGAAGGAGTCAAGGGAAAAAGCAAGAGCAAGAGCAAGGGAAAGAACTAGTAACAAGATCTCCAACATAAGGGGGGTGCAAGAAGTAGAATTGAAGAAAAAATATGAAAATAATCTTCAAGCTTATCAACAAGATCATCATAGTGAAGGACCAAGAAATGATTTTAATGTTATTGAAGAATCAATTGTGATTAAGAGGAAGTTGAAGCCTTCTATGATGGTTTCTCATCATCATCATCATCATCATCCTCATTACCATCAAAGCCATGTGATCCCTAAGGAATCATCAACAAGTTTCAACAACAATGGAGATTACAATTTCTTGCCAAATTCATCTCCAAATTGGGATGCTAGTAATAATGGTACATCTTCCACTAATCGCTCCACCTTTTGTGCTATAGCCAGCATGAATCTTTCTACAGGGCTCCAAATCTTTGGAAAATCATGGGAGGAATGCACCAATCCACGTCTACATTAG 1230 0.3667 MFPYSSNPYPSFLPSSSSSSSSSTSSLFPFPFLNPENASSNNNTLFHDPFSIPYIPIHHHPHPNLHNITNIPETLTNLAASQENNNNSNNNNNIAIPMPKQDPSSLGGSSHYGISCFLTKKPVKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKDLTKSKQRNNTSEVGGDAKSFTSSSDCEDSEIATNNSSNLKQHKEGAGSKLEEKKLKRVQIKEPACVRASKMKESREKARARARERTSNKISNIRGVQEVELKKKYENNLQAYQQDHHSEGPRNDFNVIEESIVIKRKLKPSMMVSHHHHHHHPHYHQSHVIPKESSTSFNNNGDYNFLPNSSPNWDASNNGTSSTNRSTFCAIASMNLSTGLQIFGKSWEECTNPRLH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03377 409 MobiDBLite consensus disorder prediction 188 224 - -
Mepo5g03377 409 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 63 354 IPR005333 GO:0003700
Mepo5g03377 409 MobiDBLite consensus disorder prediction 248 267 - -
Mepo5g03377 409 MobiDBLite consensus disorder prediction 341 356 - -
Mepo5g03377 409 Pfam TCP family transcription factor 123 271 IPR017887 -
Mepo5g03377 409 MobiDBLite consensus disorder prediction 324 338 - -
Mepo5g03377 409 MobiDBLite consensus disorder prediction 183 234 - -
Mepo5g03377 409 ProSiteProfiles TCP domain profile. 124 182 IPR017887 -
Mepo5g03377 409 MobiDBLite consensus disorder prediction 324 356 - -
Mepo5g03377 409 ProSiteProfiles R domain profile. 253 270 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03377 Mepo-Chr5 41639838 41642051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03377 15 272 TCP Transcription Factor Family AT1G67260 33.840 1.12e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo5g03377 TCP 9.9e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03377 - - cam:101499957 499.975