Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03357 ATGCTAGAAGATAACTGTGTTCATCTCCGAATTGGTTACCACACAAGAGGCGCAGCCGCAGCCGCAAAAGAACCTCGTGAGTTCAATAATGGCATCAAGGTTTACGAGTTGAGGCAGAAGACCAAAACTGGTCTGTTGGCTTTGCTCTGTGTTGCTAAGGTCACTGGGGGTGCAACCAACAAGCTCTCCAAAATTAAGGTGGTAAGGTTGTCGATTGCTCAGGATTTGACAGTGATTTCCCAGAAGCAGAAAGCTGCATTGAGGGAAATTTACAAGAACAAGAAGTATTTGCCACTTGATCTCCGCCCAAAGAAGACCAGGGCCATTCGCAGGAGGCTCACTAAGCATCAGTCCTCATCGAAGACCGAGAGGGAAAAGAAAAAGGAGACATATTTCCCAATGAGGAAATATACTATCAAGGCATAG 426 0.4601 MLEDNCVHLRIGYHTRGAAAAAKEPREFNNGIKVYELRQKTKTGLLALLCVAKVTGGATNKLSKIKVVRLSIAQDLTVISQKQKAALREIYKNKKYLPLDLRPKKTRAIRRRLTKHQSSSKTEREKKKETYFPMRKYTIKA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03357 141 PANTHER 60S RIBOSOMAL PROTEIN L35 32 141 IPR045059 GO:0000463|GO:0022625
Mepo5g03357 141 FunFam 60S ribosomal protein L35 29 95 - -
Mepo5g03357 141 SUPERFAMILY Ribosomal protein L29 (L29p) 32 83 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mepo5g03357 141 Gene3D - 30 95 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mepo5g03357 141 Gene3D - 96 141 - -
Mepo5g03357 141 FunFam 60S ribosomal protein L35 96 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03357 Mepo-Chr5 41313245 41315308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03357 32 140 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 77.311 4.73e-55 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03357 K02918 - apan:127248322 174.096