Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03345 ATGAGAATGAGTTGTAATGGATGTAGAGTTTTAAGAAAAGGGTGTAGTGAAGATTGTAGCATAAGACCATGTTTGGAATGGATCAAGTGTCCTCAATCACAAGCTAATGCTACTGTTTTTCTTGCTAAGTTTTATGGTCGTGCTGGTCTCATCAACCTCATCAATTCTGGTTCTGAAAATCTTCGTCCTGCAATTTTTCGTTCATTGCTCTATGAGGCTTGTGGGAGGATCGTGAACCCTATTTATGGGTCAGTGGGTCTTTTATGGTCTGGTAGCTGGCACCTCTGTCAAGCCGCTGTGGAAGCCGTTTTGAAGGGTGAGCCGATCACTCCGATAGCTTCGGAGACTGCTGAAAATGAGAGGGGCCCACCCTTCAAGGCCTATGACATACGCCACGTGTCAAAAGATGAGAACTCGGAGGAGACAAAGCAGGTTAGGACTCGGTCCCGCTTCAGACGATCCCTGAAGCCGAAGCCAAGCAAAGAAGTTGGGTCTGGTTCAGGGTCCAGTTCGGCCAAAGAGGGGGACCGGTCCAAAAGCCAAGAATCTTCGCTGAGTCAGCCGGGTAAAGATAGTGAAAGTGGGGTTTCTGTGGAGACTTCAATCCTTTTTCATGATGAGTCGGAGTTTGAACCTGAGTCAGAAGCTAAGCTAAGGGGTCGAGCTGAGGAAGGTGTGAGTGATGGGGTTGGCTTGGAGCTTAGGCTTGGTATTGAACCGGTGTCACATGAGGAGTACATGGTTCCCATAAAGAAGAGGAAAATTGTGTTGAAGGATTGTAGTGTTTCTTCTAAGGTGGAGCTTGGGCTTGATCTTTCAGCTTGA 825 0.4752 MRMSCNGCRVLRKGCSEDCSIRPCLEWIKCPQSQANATVFLAKFYGRAGLINLINSGSENLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGEPITPIASETAENERGPPFKAYDIRHVSKDENSEETKQVRTRSRFRRSLKPKPSKEVGSGSGSSSAKEGDRSKSQESSLSQPGKDSESGVSVETSILFHDESEFEPESEAKLRGRAEEGVSDGVGLELRLGIEPVSHEEYMVPIKKRKIVLKDCSVSSKVELGLDLSA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03345 274 PIRSF AS2 1 274 IPR017414 -
Mepo5g03345 274 MobiDBLite consensus disorder prediction 122 148 - -
Mepo5g03345 274 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 200 - -
Mepo5g03345 274 MobiDBLite consensus disorder prediction 114 226 - -
Mepo5g03345 274 MobiDBLite consensus disorder prediction 181 201 - -
Mepo5g03345 274 MobiDBLite consensus disorder prediction 204 226 - -
Mepo5g03345 274 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Mepo5g03345 274 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03345 Mepo-Chr5 41115213 41117252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03345 1 270 AS2 family AT3G02550 52.878 1.60e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g03345 LOB 5.2e-24 No_clan