Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03330 ATGAGTGATGATGTTAGTGTGAATGGTTCATCTTGTTTAGCAATAACAGAGAAGAAGAATAATCAAAAGCTAGGTGGTGGATGTGTTGGAATTTTCTCTCAGCTGTTTGATTGGAATAGTAGACTCACAAAGAAGAGATTTTTCACCAAAAAACTTCTTCCTCCTCCTGCTTGTGCAAAAAGAGATTCTTTGAAGAAGTTTAAAGGAGATGACAAAATGCCAAATTCCCAACTCCATTTGATTGCTAATGGGAACAGTGGAGGTTTTTCAAATGCGAAAAAAAGTGGGAATTGTGTTATAGAGGTAGAACAAAAGCATGAAATGAAAGCACCAAGTCTTGTAGCTAGGTTGATGGGTCTAGAATCAATTCCATCTTCAAAGAGAGATAAATCCAAGAAATCTTCATTTTCTGATAGTGATGATGGTGAGGAGTCTTTGGAGATCAAAGTTGCGAATGCAAGGCATGAGTCAAGGCCTCAGAAGCTTCGGAAAACGGAGGCGAACGAGAGAAGAGCAGTGACTAGGTTTGGTGCTGATGCATTGCAAATCAAGAGTGTTTTGTCGCAAGTGAGAAGGTACAATCATCATCGTCACAGTCACCATCACGCTAATAAACTTGTTTCGCCTTTGAAGAGTCCGAGAATTTCTTCGGGAAAGAGTACATCTCGAAGCTCAAGGTTGATAGAAGCAGCTACTAAGATCTTGGAACCTGGTTTGCAGGCTACAAACAGATCCAAATGTTTTCTTACATCTTCCATTTCAAAGTGTCCTACCAATAACGGAATTGTGACAGAAATGGATGCAACTTGGCCACAAGATATACACAATCAATCATGTTATAATTCTGGCATAGACAAGTCATTGGGGGAGCATACATGCAAAAATTGCGGCAATTCGCTTGATGTTGAGATCAGCAGACCTATTGTTTCAGATGTTTTCACCGACTTCTCTTCAGCATCAGCGCAAAACAAAAGGTCATTCATACCCTCTCATGAAAATGATGTAGTTCTTCTCAGAAGCCAGGAGAAGATCATAACTCATGTTGATGACGATGTTAAAAAGAATGCTTATGCTTGTAATGAATCCACTTCCAGAAGAATATATGTGCTTGCAAAATGTGATTCATCACGCGAACCTCATGGAGGCTTAGAGGACGATGGTATATCCTCTTTTTCCTTCAAACATAAAACTCGACCACAAGAAGGGATGTTAAACAATGAAAGAATATCATTTGAATCAAGAAATAGTAATATGCAAGAGAAGAGAGTCTCATCAGCTACAACTTCAAGCACTGTAAGTGGTAATAAAGACTTTGTTGGTTTGAATCAAAGCCTAAGTGGTCGAACTCGGATAAGGTCTCCTACTAAGGCAGATAGATGCAAATTTGATCTAGAAAGGAAACCTTCAAGCAGACAAGGTTCTGATGCACAAGGAGAAAAAAGGAAGAATTTTGACACTTCCTCTCCAAACAATTCTAATGTCAAATGTAAAAGAGGAGGTTATCTAAAAACCGATAAGATGAACAAGGCAGCACCATCTACCTTTAGTTCACCTTTTAAGAAAAAGGAAGAGGCAAAAAGTGATAATGAGATTCGGACATGTTTCCAAAGACATCATCGACCCCTGAGAGAAGATGTTTTAGGTGCTTTTCTAGAACAGAAGCTGAAAGAATTAAGGTCCAGAGAAAGTGAGGAGTTGGTTACTGGTGATCAACCTAAAAGATCACCTGCATTGATTCTTCAAGAATTGATATCTGTTCTGAATGCAGAGCACCTAACATGTTCCATTGATCAAATGTTCAATGACAAATGTCCCAAGTGTGAGACAAATCATGTTGGATTATTCGGAACCTCGTGCAATGGTAATCATCTCAGTCCTGGATCAGTCTTGGAAGCTTCCTTTTCTTCCAGTAGTCTCGATGAAGGCTCAGGGCATTGTTTTCACCCTGGCTCTACAAATTGTCTTTACGACCAACCTGAACGATTGAAACATGAAGGCGAACTTTTAGATTCCGCAGCATCATTTAACACAGGGAAGATAGGTTGTAAGATACTGACCAAACTTGTTTACCGAATTGATAAGATATTACAAAGTTTAGATTCTTTTTGGACAAGATTGACAGGAAGCAAGCTGGATCATATGAAAGAAGTTATCTTCATTGCTGAATTGGTTCTTGGAAATGTCACTAGGAACAATGAGGAAGGAGTATTGCCACAGCTTCTCATTTCTTGCATTCTTCTTGATGAACTCAACATTGCAACCGATGCTACGCAGAGGAATTTTAATCGAAACCAACTTAAGGGATTTCTGTTTGATTGTGTAATAGAGTATCTAGAATCAAATTGCTGCCAAAATTATTATGGTGTGTTTAAGTCATGGTGTGCATGGACAAAGGCTCCTTTATGCATGAAAGCTGAGATTTTGGTTCAAGAGGTCAAGAGTGAGATTAAAAAGTGGGAATGTATGGTTGGCATGGAACTAAACCAAATAATTGATTGGGAGATGAGTCACTCATTAGGAAAATGGACTGATTTCGACATTGAAGCTTTTGAGGTCGGTGTTGATATTGGTGGGGATGTACTTCAAATTTTGGTCGATGAAATTGTTGAAGATCTTGTAGATTTTAGGCTTGGTACTATTTGA 2643 0.3882 MSDDVSVNGSSCLAITEKKNNQKLGGGCVGIFSQLFDWNSRLTKKRFFTKKLLPPPACAKRDSLKKFKGDDKMPNSQLHLIANGNSGGFSNAKKSGNCVIEVEQKHEMKAPSLVARLMGLESIPSSKRDKSKKSSFSDSDDGEESLEIKVANARHESRPQKLRKTEANERRAVTRFGADALQIKSVLSQVRRYNHHRHSHHHANKLVSPLKSPRISSGKSTSRSSRLIEAATKILEPGLQATNRSKCFLTSSISKCPTNNGIVTEMDATWPQDIHNQSCYNSGIDKSLGEHTCKNCGNSLDVEISRPIVSDVFTDFSSASAQNKRSFIPSHENDVVLLRSQEKIITHVDDDVKKNAYACNESTSRRIYVLAKCDSSREPHGGLEDDGISSFSFKHKTRPQEGMLNNERISFESRNSNMQEKRVSSATTSSTVSGNKDFVGLNQSLSGRTRIRSPTKADRCKFDLERKPSSRQGSDAQGEKRKNFDTSSPNNSNVKCKRGGYLKTDKMNKAAPSTFSSPFKKKEEAKSDNEIRTCFQRHHRPLREDVLGAFLEQKLKELRSRESEELVTGDQPKRSPALILQELISVLNAEHLTCSIDQMFNDKCPKCETNHVGLFGTSCNGNHLSPGSVLEASFSSSSLDEGSGHCFHPGSTNCLYDQPERLKHEGELLDSAASFNTGKIGCKILTKLVYRIDKILQSLDSFWTRLTGSKLDHMKEVIFIAELVLGNVTRNNEEGVLPQLLISCILLDELNIATDATQRNFNRNQLKGFLFDCVIEYLESNCCQNYYGVFKSWCAWTKAPLCMKAEILVQEVKSEIKKWECMVGMELNQIIDWEMSHSLGKWTDFDIEAFEVGVDIGGDVLQILVDEIVEDLVDFRLGTI 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03330 880 MobiDBLite consensus disorder prediction 199 223 - -
Mepo5g03330 880 MobiDBLite consensus disorder prediction 413 528 - -
Mepo5g03330 880 Pfam Domain of unknown function (DUF4378) 741 867 IPR025486 -
Mepo5g03330 880 Pfam DUF761-associated sequence motif 103 129 IPR032795 -
Mepo5g03330 880 MobiDBLite consensus disorder prediction 124 167 - -
Mepo5g03330 880 MobiDBLite consensus disorder prediction 483 497 - -
Mepo5g03330 880 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 12 871 - -
Mepo5g03330 880 MobiDBLite consensus disorder prediction 413 451 - -
Mepo5g03330 880 MobiDBLite consensus disorder prediction 452 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03330 Mepo-Chr5 40817077 40821348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03330 1 872 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.162 2.38e-80 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03330 - - tpra:123910908 1155.2