Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03310 ATGGGTGGTGGTGAACAAAAAAATGTTTCCATTAATGTTAAGAAGAAAAAGAAAAATGGTTCTTTTAAGTCCATTTTCATGCATGCTGATGTTGTAGATTGGTTTTTCATGGCTATTGGTGATGGCATGATGGTCCCTTTGGTCTTGTTTATCACAAGTAGAATTATGAACTCTCTTGGTAGTGCTTCTGGCACATCAAGCAGCAATTTTGTCCATGACATCAATAAGAATGCAGTTGTTGTGTTATACATGGCCTGTGCTTCTTTTTTTGCTTGCTTCCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGTTAGGTACTTAAAAGCAATTCTAAGACAAGAAGTAGCATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACGAGTGTATCTAATGACAGCCTAGTAATTCAAGATGTTCTTAGTGACAAGGTTCCAAATTTTTTGATGAATGCATCTAGGTTCCTTGCAAGCTACATTGTGGCATTTGCATTATTATGGAGATTGGCTATTGTTGGATTCCCTTTTGTGGTTCTACTTGTGGTTCCTGGTTACATGTATAAGAGGACTTCGATGAGGTTGGCTAGAAAGATCAGAGAAGAGTACAAACAAGCTGGTACAATAGCGGAACAAGCAATATCTTCTATAAGAACTGTTTATTCTTTTGTAGGAGAAAGCAAAACCATAGCAGCTTTCTCTAATGCTTTGGAAGGGTCAGTGAAATTAGGTTTGAAACAAGGTTTGGCTAAAGGCATAGCCATAGGAAGCAATGGTGTTATTTATGCTATATGGTCTTTAATATGCTATTATGGTAGCATACTGGTCATGTATCATGGTGCTAAAGGTGGTAATGTATTTGCAGTTGGAGTAACATTAGCAATTGGTGGATTGGCTTTTGGAACTAGTTTATCAAATGTGAGGTACTTCGCAGAAGCAAGTGTTGCAGGAGAAAGAATAATGGAAGTGATAAAAAGAGTTCCAAAGATAGATTCTGAAAATATGGAAGGTGAAATTCTAGAGAATGTCTTAGGGGAGGTTAATTTCAACCATGTTGAATTTGTGTATCCATCAAGACCAGAAAGTGTGATCTTAAATGATTTTTGCTTAAAGGTTCCATCAGGAAAAACAGTGGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACAGTTGTATCACTTTTGCAAAGATTTTATGATCCAATTGGTGGAGAGATTCTACTTGATGGAGTTGCTATTCATAAGTTGCAACTTACGTGGCTAAGGTCTCAAATGGGTTTAGTTAGTCAAGAACCTACTTTGTTTGCAACAAGTATTATAGAGAATATAATTTTTGGAAGAGAGGATGCTACATATGAAGAAATTGTGGATGCTGCTAAAGCTTCTAATGCTCATAATTTCATTTCAATGCTACCACAAGGATATGATACTCAGGTTGGGGAGAGGGGAATTCAAATGTCAGGGGGACAAAAGCAAAGGATTGCCATTGCAAGAGCCATAGTAAAGATGCCAAAAATTATATTGCTAGACGAAGCAACAAGTGCACTTGATTCTGAATCCGAACGAGTTGTCCAAGAAGCTCTAGACAAAGCTGCAATTGGACGCACCACCATCATCATCGCTCACCGCTTATCCACCATCCAAAATGCAGACATCATTGCAGTTGTTCAAAATGGTAAGATCATGGAAACAAGATCTCACAAAAGCCTCTTGCAAAATGATAGTTCTATTTACACCTCCCTAGTTCATCTCCAACACACCAAAAATGACCAAAACGACGACACTCTATCTATCATGAATAGACATCACATTCAAGACACTGGTAGTTTTAGATTTGTGAGTCGTTCTAGCACTTTCAACTCAATGACAAATGGCGGTGGTGATATCGTTACTTATATCAATGTTGTTGAAGATGTTGTTAACGAAGTTGATAATGATACTAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGGTTCCCTCATTTCGAAGGTTGTTGGCAATGAATGTTCCAGAGTGGAAGCAAGTGTGTTTGGGATGTTTGAATGCGGTTTTATTCAGTGCGGTTCAACCTATTTCCGCATTTGCAACGGGATCAGTTGCATCAGTTTATTTTCTGAATGACCATGATGAGATGAAGAAGCAGATTAGGATATATGCTTTTTGTTTTCTAGGGTTGGCTTTGGCATCTATTGTTTTCAATATGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGATTAGAGAAAGAATGTTTTACAAAATACTCACTTTTGAAGTTGGATGGTTTGATGAGGATCAAAATTCCACGGGTGCTATTTGCTCTAGACTTGCCAAGGAAGCCAACGTGGTAAGATCTTTGGTGGGTGATAGATTGTCATTAGTGGTACGAACTATATCAGCAATGATAATAACTTTCACCATGGGTCTAATCATTGCTTGGAGACTATCTATTGTTATGATATCAGTTCAACCAATTACCATATTTTGTTTCTACACAAGACGTGTTCTTCTTAATAGCATGTCAAGTAAAGCCATTAAGGCTCAAGATGCAAGTAGCAAAATAGCAGCCGAAGCTGTTTCAAACCTAAGAACCATCACATCTTTTTCATCACAAAATAGAATCCTCAAAATGCTTGAAAAAGCCCAACAAGGTCCAAGTCATGAAAGTATTAGACAATCTTGGTTTGCAGGTATTGGGCTTGCATGTTCACAAAGCCTCATTTTTTGTACTAGAGCCTTAAACTTTTGGTATGGTGGAAAACTTGTCTCACATGGATATATAACAAAAAAGCAATTCTTTGAGACTATTATGATTTGGATAAGCATTGGAAAAGTTATTGCCGATGCTGCCAGTAGCATGACTAATGATCTTGCTAAAGGTTCTGATGTTGTTGGATCGGTTTTTGCAATTCTTGATAGGTATACAAAAATTAAGTCAGATAATTTAGAAGGTTTCAAAGCTGAAAAGTTGATAGGAAAAATTGTATTTCATGATGTACATTTTGCATATCCGGCTAGGCCTAGTGTGATGGTCTTTCAGGGGTTTTCTATTGAAATTGACGCTGGAAAATCAACAGCTTTGGTTGGAGAAAGTGGTTCTGGAAAATCGACAATCATAGGACTAATTGAGAGATTCTATGATCCACTTAAAGGGATAGTGACAATTGATGGTAGAGACATAAAGACTTATCGTCTAAGGTCATTAAGGAAACATATTGCACTTGTAAGTCAAGAACCAACATTGTTTGGTGGTACCATAAGAGAAAATATTGTGTATGGAGCATATGATGATAAATTTGATGAGAGTGAGATTATTGAGGCATCAAAGGCTGCAAATGCTCACGATTTCATATCAAGTTTGAAACATGGTTATGACACATTGTGTGGTGATAGAGGAGTTCAACTTAGTGGTGGTCAAAAACAAAGAATTGCAATAGCTCGAGCTATATTGAAAAATCCGGAGGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAATCAATCAGAGAAATTAGTCCAAGATGCTTTAGAAATGGTTATGGTTGGAAGGACAAGTGTGGTTGTGGCACATAGGTTGAGTACTATACAAAATTGTGATTTAATTGTTGTTTTGGATAAGGGAAGTGTTGTTGAGAAAGGAACACATTCATCTTTGTTGTCTAAAGCGCCAAGTGGAGCTTATTACTCTTTAGTAAGTCTACAAAGAAGGCCAAACAATATAATTGCTGATTCTTCACATGAAATTAACTAA 3813 0.3716 MGGGEQKNVSINVKKKKKNGSFKSIFMHADVVDWFFMAIGDGMMVPLVLFITSRIMNSLGSASGTSSSNFVHDINKNAVVVLYMACASFFACFLEGYCWTRTGERQAARMRVRYLKAILRQEVAYFDLHVTSTSEVITSVSNDSLVIQDVLSDKVPNFLMNASRFLASYIVAFALLWRLAIVGFPFVVLLVVPGYMYKRTSMRLARKIREEYKQAGTIAEQAISSIRTVYSFVGESKTIAAFSNALEGSVKLGLKQGLAKGIAIGSNGVIYAIWSLICYYGSILVMYHGAKGGNVFAVGVTLAIGGLAFGTSLSNVRYFAEASVAGERIMEVIKRVPKIDSENMEGEILENVLGEVNFNHVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLTWLRSQMGLVSQEPTLFATSIIENIIFGREDATYEEIVDAAKASNAHNFISMLPQGYDTQVGERGIQMSGGQKQRIAIARAIVKMPKIILLDEATSALDSESERVVQEALDKAAIGRTTIIIAHRLSTIQNADIIAVVQNGKIMETRSHKSLLQNDSSIYTSLVHLQHTKNDQNDDTLSIMNRHHIQDTGSFRFVSRSSTFNSMTNGGGDIVTYINVVEDVVNEVDNDTNKKKKKKKKKKKKKVKVPSFRRLLAMNVPEWKQVCLGCLNAVLFSAVQPISAFATGSVASVYFLNDHDEMKKQIRIYAFCFLGLALASIVFNMLQHYSFAYMGEYLTKRIRERMFYKILTFEVGWFDEDQNSTGAICSRLAKEANVVRSLVGDRLSLVVRTISAMIITFTMGLIIAWRLSIVMISVQPITIFCFYTRRVLLNSMSSKAIKAQDASSKIAAEAVSNLRTITSFSSQNRILKMLEKAQQGPSHESIRQSWFAGIGLACSQSLIFCTRALNFWYGGKLVSHGYITKKQFFETIMIWISIGKVIADAASSMTNDLAKGSDVVGSVFAILDRYTKIKSDNLEGFKAEKLIGKIVFHDVHFAYPARPSVMVFQGFSIEIDAGKSTALVGESGSGKSTIIGLIERFYDPLKGIVTIDGRDIKTYRLRSLRKHIALVSQEPTLFGGTIRENIVYGAYDDKFDESEIIEASKAANAHDFISSLKHGYDTLCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDNQSEKLVQDALEMVMVGRTSVVVAHRLSTIQNCDLIVVLDKGSVVEKGTHSSLLSKAPSGAYYSLVSLQRRPNNIIADSSHEIN 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03310 1270 Gene3D - 346 595 IPR027417 -
Mepo5g03310 1270 CDD ABC_MTABC3_MDL1_MDL2 1014 1255 - -
Mepo5g03310 1270 ProSitePatterns ABC transporters family signature. 495 509 IPR017871 GO:0005524|GO:0016887
Mepo5g03310 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1009 1255 IPR027417 -
Mepo5g03310 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1014 1252 IPR003439 GO:0005524
Mepo5g03310 1270 Pfam ABC transporter 1033 1183 IPR003439 GO:0005524
Mepo5g03310 1270 PANTHER ABC TRANSPORTER B FAMILY 11 595 IPR039421 -
Mepo5g03310 1270 FunFam ABC transporter B family member 4 1004 1260 - -
Mepo5g03310 1270 CDD ABC_MTABC3_MDL1_MDL2 356 594 - -
Mepo5g03310 1270 FunFam ABC transporter B family member 4 346 602 - -
Mepo5g03310 1270 Gene3D - 1004 1263 IPR027417 -
Mepo5g03310 1270 SMART AAA_5 1041 1235 IPR003593 GO:0016887
Mepo5g03310 1270 SMART AAA_5 383 555 IPR003593 GO:0016887
Mepo5g03310 1270 SUPERFAMILY ABC transporter transmembrane region 34 340 IPR036640 GO:0005524|GO:0016020
Mepo5g03310 1270 ProSitePatterns ABC transporters family signature. 1155 1169 IPR017871 GO:0005524|GO:0016887
Mepo5g03310 1270 FunFam ABC transporter B family member 1 24 353 - -
Mepo5g03310 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 697 948 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03310 1270 Pfam ABC transporter 374 523 IPR003439 GO:0005524
Mepo5g03310 1270 SUPERFAMILY ABC transporter transmembrane region 677 992 IPR036640 GO:0005524|GO:0016020
Mepo5g03310 1270 CDD ABC_6TM_Pgp_ABCB1_D1_like 35 329 - -
Mepo5g03310 1270 Pfam ABC transporter transmembrane region 691 957 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03310 1270 Pfam ABC transporter transmembrane region 34 298 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03310 1270 Gene3D ABC transporter type 1, transmembrane domain 665 993 IPR036640 GO:0005524|GO:0016020
Mepo5g03310 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 35 321 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03310 1270 CDD ABC_6TM_Pgp_ABCB1_D2_like 680 997 - -
Mepo5g03310 1270 Gene3D ABC transporter type 1, transmembrane domain 29 654 IPR036640 GO:0005524|GO:0016020
Mepo5g03310 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 356 592 IPR003439 GO:0005524
Mepo5g03310 1270 FunFam Putative ABC transporter B family member 8 654 1002 - -
Mepo5g03310 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 594 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03310 Mepo-Chr5 40552883 40560745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03310 2 1256 Calmodulin-binding Proteins AT2G36910 42.622 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03310 K05658 - gmx:100807709 1847.02