Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03309 ATGTACACTTCAAGGAAGAAAATCAGCAAGGACAAAGGTGCTGAGCCAACTGAATTTGAGGAATCTGTTGGACAGGCTTTGTTTGATCTCGAAAACACAAACCACGAGCTGAAAAGCGAGCTCAAAGATTTATACATTAATTCAGCAGTCCAAGTCGATGTTTCTGGCAACCGCAAGGCTGTGGTTATCCATGTCCCATATAGATTGAGGAAGGGATTCCGCAAAATTCATGTCAGGCTTGTTAGGGAGCTCGAGAAGAAATTCAGCGGCAAGGATGTTATCCTGATTGCTACCAGGAGGATTGTTCGGCCACCAAAGAAAGGTTCCGCTGCTCAGCGCCCCCGTAGCCGTACACTTACTGCTGTCCACGAGGCAATGCTCGAGGATGTTGTGTTACCTGCCGAGATTGTTGGCAAGCGCACTAGGTACCGAGTTGATGGATCAAAGATCATGAAGGTGTTTTTGGACCCAAAGGAGAGAAACAATACCGAATACAAGTTGGAGACATTTTCTGCTGTTTACAGGAAACTATCTGGCAAAGATGTTGTGTTTGAGTATCCCGTTACCGAGGCTTAG 576 0.4618 MYTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEYPVTEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03309 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Mepo5g03309 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Mepo5g03309 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Mepo5g03309 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03309 Mepo-Chr5 40531548 40534689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03309 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 80.628 1.71e-116 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03309 K02993 - gmx:100527680 355.91