LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g03307	ATGACTAATCGGAGGAAATATGATAACTTAATTATAAAAGAAGCTGTTTTCTTTGTTCGTTCTGCCAGGCTTCGTTTAGAAACAGCGATGATCGAAGCTGTTTTGGGTTTTCCTTTAAAATCCAGGTGCAGGGTTTGGTTAATTCGTGTTGGCGGTCGCATCCTAAGCCTTCTGAAAAATATGTATTCGGACTCGAAAGGATATGTTGAGTTCTGCAAGTTTCAAAGATATGGGGTTGCTGGTGGAACTGCATCTGGGAAAACAACTGTGTGCAACTTGATAAATAGTCAATTTCATGATCAACGTGTTGTCCTCATTAATCAAGACTCATTTTACCACTCATTGAGTGACGAGACATTGCAAAAAGTTAATGACTACAACTTTGATCATCCTGATGCATTTGATACGGAGCTTATGCTTTCTTGTATGGATAAATTAAAACATGGACAAACTGTTACCATACCAAATTATGATATCAATAGCCGAAAGAGAACTGAACCTTCACGTCAGGTTCACCCTGCAGATATCATAGTTTTAGAAGGGATACTAGTTCTTCATGATTCTCGTGTCCGCAATCTTTTGAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGCGTCTTACACGAAGGATTCAACGTCTCGCCATTGAACGTGGGAGGAACATTCAAAATGTTCTAGACCAATATTGCAGATTTGTAAAACCAAGTTTTGAAGATTTTGTACTTCCAACAAAAAAATATGCTGATATAATCATCCCTGGAGGAGATAATGATGTTGCTACTGATTTGATAATACAAAATATACGTTCAAAGCTTGGTCAACATGATATGTGTAAAATATATCCAAATATTTTTGTCATTTTCTCTACATTTCAGATAAAGGGAATGCATACTCTAATACGTGATGTTGGAACCTCAAAACATGATTTTGTTTTTTATTCAGATCGTCTAATTAGGCTGGTTGTTGAGCATGGATTAGGTCACCTTCCTTTTACCGAAAAGCAAGTCACAACACCAACAGGATCTGTATACTCTGGTGTTGTTTTCTGTAGCAGCCTATGTGGAGTATCAATTATTAGAAGTGGAGAAAGCATGGAAAATGCATTGAGAGCATGTTGCAAAGGAATCAAAATTGGTAAAATTCTTATTCTTGGAGATGGCTCAAATGGAAGGCAGTTAATCTATGAGAAGTTACCATCAGATATTGCAAATCGTCATGTGTTGTTACTTGATCCAGTTTTGGCTACAGGAAATTCTGCAACGAAAGCCATCTCTCTACTTCTAAAGAAAGGTGTACAAGAATCTAACATCATCTTCCTAAATTTAATAGCAGCACCACAAGGAATAAATGCCATTTGTGAGAAATTTCCAATGTTAAAACTTGTCACATCAGAGATTGATGCAACCCTAAATGAGAATTCTCGTGTGATCCCTGGCATGGGGGAGTTTAGTGATCGTTATTTTGCCACCGATGATTAG	1482	0.3704	MTNRRKYDNLIIKEAVFFVRSARLRLETAMIEAVLGFPLKSRCRVWLIRVGGRILSLLKNMYSDSKGYVEFCKFQRYGVAGGTASGKTTVCNLINSQFHDQRVVLINQDSFYHSLSDETLQKVNDYNFDHPDAFDTELMLSCMDKLKHGQTVTIPNYDINSRKRTEPSRQVHPADIIVLEGILVLHDSRVRNLLNMKIFVDEDSDVRLTRRIQRLAIERGRNIQNVLDQYCRFVKPSFEDFVLPTKKYADIIIPGGDNDVATDLIIQNIRSKLGQHDMCKIYPNIFVIFSTFQIKGMHTLIRDVGTSKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTGSVYSGVVFCSSLCGVSIIRSGESMENALRACCKGIKIGKILILGDGSNGRQLIYEKLPSDIANRHVLLLDPVLATGNSATKAISLLLKKGVQESNIIFLNLIAAPQGINAICEKFPMLKLVTSEIDATLNENSRVIPGMGEFSDRYFATDD	493

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g03307	493	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	75	265	IPR027417	-
	Mepo5g03307	493	Gene3D	-	77	275	IPR027417	-
	Mepo5g03307	493	PRINTS	Uridine kinase signature	104	115	-	-
	Mepo5g03307	493	PRINTS	Uridine kinase signature	219	230	-	-
	Mepo5g03307	493	PRINTS	Uridine kinase signature	205	215	-	-
	Mepo5g03307	493	PRINTS	Uridine kinase signature	149	164	-	-
	Mepo5g03307	493	PRINTS	Uridine kinase signature	74	91	-	-
	Mepo5g03307	493	PRINTS	Uridine kinase signature	241	254	-	-
	Mepo5g03307	493	PANTHER	URIDINE KINASE	72	402	-	-
	Mepo5g03307	493	FunFam	Uridine kinase	74	275	-	-
	Mepo5g03307	493	Pfam	Phosphoribulokinase / Uridine kinase family	78	256	IPR006083	GO:0005524\|GO:0016301
	Mepo5g03307	493	SUPERFAMILY	PRTase-like	275	491	IPR029057	-
	Mepo5g03307	493	FunFam	Uridine kinase	276	491	-	-
	Mepo5g03307	493	NCBIfam	uridine kinase	78	273	IPR000764	-
	Mepo5g03307	493	CDD	UMPK	78	272	IPR000764	-
	Mepo5g03307	493	Pfam	Uracil phosphoribosyltransferase	290	491	-	-
	Mepo5g03307	493	CDD	PRTases_typeI	354	464	IPR000836	-
	Mepo5g03307	493	Gene3D	-	276	491	IPR029057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g03307	Mepo-Chr5	40506059	40513610	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g03307	30	493	PRT Gene Family	AT4G26510	67.452	0.0	641

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g03307	K00876		-	mof:131168055	678.322