Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03267 ATGGTAGTTGATCTCTCTCCTCAATCATCCAAAAGAAGAAGAAGAATCACCAACCCTCATTCAATGGCCACAATTGCAGAGATGCATGAAAAATTTGGACGCGAAATTCGTGTTTTTGAAACAATGTCACTTTCTGCATCATCAAATGATGCAGCAAACAAAGAGGAGACAGAAGAGTTCTATGAGTTTACTGCTGAAGATTATTACAAAATCTTGGCTACTAAAAAAGAAGATAAATTCCTGAAGACTCGAAAACTTCGAGACGCAGATCTGGCAGCTCGCAGGTCAAGAATAACAAAGGCTGTAATAAGAGTTCGCTTCCCTGATAATCACACACTGGAAGCTACCTTCCATCCATCAGAAACCATTCAGAGTTTAATTGATCTCCTCAAGAAAGTGATTGCACAACCAGAGAAACCATTTTATTTATATACTACTCCACCTAAGAAGCTGGTCAAAGACATTTCCCAGGATTTCTATACTGCTGGATTTTGCCCTGGTGCCATTGTGTATTTCTCATATGATGTTTCAAAAGGTGATAGCAGCGACGAAGGCCCTTACCTACCTGAAGAGGTCATGTCTTTGAAAGGTTTGAATTTCTCTGACGATAAAGGCCAGTCGTCAAATCCTGCACAGTCTGCGCCGGTGTCTGCTGAGCCTGTCGTGCAACCTCCTGCTGAAGAGAGAAAACCGGCCGAGAAAAAGCTTGTCAAGCCAAAGTGGTTGAAAATGTGA 735 0.419 MVVDLSPQSSKRRRRITNPHSMATIAEMHEKFGREIRVFETMSLSASSNDAANKEETEEFYEFTAEDYYKILATKKEDKFLKTRKLRDADLAARRSRITKAVIRVRFPDNHTLEATFHPSETIQSLIDLLKKVIAQPEKPFYLYTTPPKKLVKDISQDFYTAGFCPGAIVYFSYDVSKGDSSDEGPYLPEEVMSLKGLNFSDDKGQSSNPAQSAPVSAEPVVQPPAEERKPAEKKLVKPKWLKM 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03267 244 CDD UBX2_UBXN9 101 174 - -
Mepo5g03267 244 MobiDBLite consensus disorder prediction 198 244 - -
Mepo5g03267 244 MobiDBLite consensus disorder prediction 200 216 - -
Mepo5g03267 244 Pfam UBX domain 99 166 IPR001012 GO:0005515
Mepo5g03267 244 ProSiteProfiles UBX domain profile. 96 172 IPR001012 GO:0005515
Mepo5g03267 244 Gene3D - 91 172 - -
Mepo5g03267 244 MobiDBLite consensus disorder prediction 226 244 - -
Mepo5g03267 244 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 5 244 IPR044232 GO:0032984|GO:0051117
Mepo5g03267 244 SUPERFAMILY Ubiquitin-like 76 172 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03267 Mepo-Chr5 39842010 39847690 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03267 13 129 C2H2 Transcription Factor Family AT2G01650 31.707 2.83e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03267 K15627 - gmx:100818386 303.138