Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03254 ATGATGGTGAATAAGAATCCATCAATACGTGACGAAGAGAATTCCAAGAACAAGGATCCGGTTATCAATGACGACGGATATTCTATCAAAACTCAGGCGGCTCTGATGGCTTTGGAAGAGAAACCTGAGACCGAGACTGTGGAATCAGCTGCGGTAAAAAAGAAAAGAAAGAAGAAGGAGAAGGAAAAGGAGAAGAAAGCAACTGCTGCAGCCGCCGGAAGTACATCGGTAATTGAAACTGCCGAGACAAGTAAACCAACGAAAAATGATTCCAAGACCAAAGGAGTTGGGAAGAAAGTGACAAAGCTTGTTAGGGAGAGGCAAGACGAACTGACTAGAAGAAAAGAGGCAGAAGAAAAAAGGAAAAAAGACGAGGAAGAGAATCTAAGGAAAGAAGAAGAGGGGCGAATAAGGTTAGAGGAACTTGAGAGACTTGCGGAAGAGGCTAAACGTAGAAAGAAGGAAAAAGAAAAGGAAAAACTCCTAAAAAAGAAGCAGAGAGAACAAGAACAACGTTTGGAGGAAATCAGGAGGCAACTTTGTAATGCTGCAGCAGCTAAAAATCAAACTGTTTCGAAGCCTGTGGCTGAAGAAACTGAAGATAGAGAAGATGAGGAGAAAAAAGAAGAGCATTATCCACAACAGGCTGCTGTGCCTTCTAGGCTGAGTGATAGTAACCTCCGGTCACCAATTTGCTGCATCATGGGTCATGTGGACGCTGGCAAGACGAAGCTTCTAGATTGTATTCGAGGTATAAATGTTCAAGAAGGTGAGGCTGGCGGTATCACTCAACAAATTGGTGCAACTTACTTTCCTGCCGAGAACATACGTGATAGAACTAAGGAACTGAAAGCTGATGCAACGCTGGAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGCCACGAATCATTCAATAACTTAAGGTCTCGGGGTTCTGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGATTAGAGCCACAAACTATAGAGTCACTCAATCTATTAAAAATGAGGAACACAGAGTTCATTATTGCATTGAATAAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATGCTCCAATTCGTAAAGCAATGAAGCAGCAGTCTGAAGATGTCAAAAATATGTTTAAAACAAGGGTCACTGAGATTGTTACTCAGTTCAAGGAACAGGGGCTAAATACTGAGTTGTATTATAAAAATAAAGAAATGGGAGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATCCCGGATATGTTATTACTATTAGTTAAGTGGACCCAAAAGACCATGACCAAGAAGCTTACATACAGCGAAGAAGTGCAGTGTACCGTTTTGGAAATCAAGATTATTGAAGGCCATGGAACTACTATTGACGTTGTTTTAGTTAATGGCGTTCTTCATGAAGGGGATCAAATAGTTGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATACATCCATCACAAAGAAATCAAAGCTGCAATGGGTATCAAGATCGCTGCCCAGGGACTTGAACATGCTGTTGCTGGCGCTAGTTTATACGTGGTGAAGCCTAATGATGATTTGGAATATCTTAAAAAAGGAGCCTTCGAAGATGTGGAGTCAGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGCGTTTGTGTCCAGGCATCTACACTTGGCTCATTGGAATCATTATTAGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTGGTGCTATAAACATAGGCCCTGTACATAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATTCTACTATATTGGCGTTTGATGTCAAAGTCACCTCTGAAGCTAAGGAACTTGCAAATAAATTGGGTGTGAAAATTTTTATTGCCGATATTATTTATCATCTATTTGATCAATTTAAGGTTTACATGGCCAACATTAAGGAGGAGAAAAAGAAAGAATCTGCCGATGAGGCAGTCTTTCCATGCGTTCTGAAGATCATACCAAATTGTGTCTTCAACAAGAAGGATCCGATTATTTTGGGAATTGGAACTCCAGTTTGTATTCCTACCCAAAATTTCATTGATATTGGTCGTATCAACTCCATTAAGATTAACGATAAACTGGTTGATAGTGCGACAAAAGGGCAGCAAGCTGTAGCCATTAAGATTGTAGGCAGAAATTCTGAGGAACAACAGAAAATGTTTGGGAGACATTTTGGGATTAATGATGAACTTGTAAGCCATATTTCACGGAGATCTATTGATGTTCTCAAAACTTATTATCGAGATGATCTATCGATGGAGGAACGTAAGCTGTTGGTGAACTTGAAGAGGATTTTCAAGATACAATGA 2421 0.4044 MMVNKNPSIRDEENSKNKDPVINDDGYSIKTQAALMALEEKPETETVESAAVKKKRKKKEKEKEKKATAAAAGSTSVIETAETSKPTKNDSKTKGVGKKVTKLVRERQDELTRRKEAEEKRKKDEEENLRKEEEGRIRLEELERLAEEAKRRKKEKEKEKLLKKKQREQEQRLEEIRRQLCNAAAAKNQTVSKPVAEETEDREDEEKKEEHYPQQAAVPSRLSDSNLRSPICCIMGHVDAGKTKLLDCIRGINVQEGEAGGITQQIGATYFPAENIRDRTKELKADATLEVPGLLVIDTPGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIIALNKVDRLYGWKTCRNAPIRKAMKQQSEDVKNMFKTRVTEIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVKWTQKTMTKKLTYSEEVQCTVLEIKIIEGHGTTIDVVLVNGVLHEGDQIVGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKIAAQGLEHAVAGASLYVVKPNDDLEYLKKGAFEDVESVLSRIDRSGEGVCVQASTLGSLESLLEFLKTPEVNIPVGAINIGPVHKKDVMKASVMLEKKREYSTILAFDVKVTSEAKELANKLGVKIFIADIIYHLFDQFKVYMANIKEEKKKESADEAVFPCVLKIIPNCVFNKKDPIILGIGTPVCIPTQNFIDIGRINSIKINDKLVDSATKGQQAVAIKIVGRNSEEQQKMFGRHFGINDELVSHISRRSIDVLKTYYRDDLSMEERKLLVNLKRIFKIQ 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03254 806 FunFam eukaryotic translation initiation factor 5B 450 564 - -
Mepo5g03254 806 SUPERFAMILY Translation proteins 681 805 IPR009000 -
Mepo5g03254 806 MobiDBLite consensus disorder prediction 41 55 - -
Mepo5g03254 806 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 227 443 IPR000795 GO:0003924|GO:0005525
Mepo5g03254 806 MobiDBLite consensus disorder prediction 194 214 - -
Mepo5g03254 806 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 28 802 IPR015760 -
Mepo5g03254 806 PRINTS GTP-binding elongation factor signature 311 322 IPR000795 GO:0003924|GO:0005525
Mepo5g03254 806 PRINTS GTP-binding elongation factor signature 295 305 IPR000795 GO:0003924|GO:0005525
Mepo5g03254 806 PRINTS GTP-binding elongation factor signature 231 244 IPR000795 GO:0003924|GO:0005525
Mepo5g03254 806 PRINTS GTP-binding elongation factor signature 347 356 IPR000795 GO:0003924|GO:0005525
Mepo5g03254 806 MobiDBLite consensus disorder prediction 85 169 - -
Mepo5g03254 806 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 548 676 IPR036925 -
Mepo5g03254 806 Pfam Elongation factor Tu GTP binding domain 231 438 IPR000795 GO:0003924|GO:0005525
Mepo5g03254 806 Gene3D Translation factors 450 563 - -
Mepo5g03254 806 Pfam Translation-initiation factor 2 555 663 IPR023115 -
Mepo5g03254 806 MobiDBLite consensus disorder prediction 185 221 - -
Mepo5g03254 806 FunFam Eukaryotic translation initiation factor 5B 677 806 - -
Mepo5g03254 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 513 IPR027417 -
Mepo5g03254 806 MobiDBLite consensus disorder prediction 1 169 - -
Mepo5g03254 806 CDD aeIF5B_II 451 552 - -
Mepo5g03254 806 CDD IF2_eIF5B 230 440 - -
Mepo5g03254 806 NCBIfam small GTP-binding protein domain 232 356 IPR005225 GO:0005525
Mepo5g03254 806 FunFam Eukaryotic translation initiation factor 5B 564 670 - -
Mepo5g03254 806 Pfam Elongation factor Tu domain 2 466 539 IPR004161 GO:0005525
Mepo5g03254 806 Coils Coil 100 183 - -
Mepo5g03254 806 Gene3D - 221 449 IPR027417 -
Mepo5g03254 806 Gene3D Translation factors 677 806 - -
Mepo5g03254 806 Gene3D - 564 670 IPR036925 -
Mepo5g03254 806 FunFam Eukaryotic translation initiation factor 5B 221 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03254 Mepo-Chr5 39672546 39695645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03254 226 806 Eukaryotic Initiation Factors Gene Family AT1G76810 78.487 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03254 K03243 - gmx:100814640 991.875