Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03253 ATGGAGTCAGGAGTCTCAGATTTCGGAATGGCAAGACTAATAAGTGCACTTGATACACATCTCAGTGTAAGCACACTAGCAGGAACACCTGGATATGTTCCACCAGAGTATTACCAAAGTTTCAGGTGCACGACAAATGGTGATGCGTATTCATTTGGTGTTGTAATGTTGGAACTTCTTAGTGGGAAAAGGCCTACTGATAAGGAGGATTTCGGTGACACAAACTTGGTTGGATGGGCTAAGATTAAGGTGAGCGAAGGGAAACAATTGGAAGTAATTATTAACACTGGTTTGCTTTTGGAGATTCAAGGAGGAACAAATGAAGCAGAAGTGAAAGAAGTAATTGACACTTATAGGCAACTCATTTGA 369 0.4092 MESGVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTTNGDAYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKIKVSEGKQLEVIINTGLLLEIQGGTNEAEVKEVIDTYRQLI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03253 122 SUPERFAMILY Protein kinase-like (PK-like) 5 74 IPR011009 -
Mepo5g03253 122 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Mepo5g03253 122 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03253 122 Pfam Protein kinase domain 5 70 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03253 122 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03253 Mepo-Chr5 39665347 39665715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03253 1 86 Receptor kinase-like Gene Family AT4G39400 75.556 7.56e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mepo5g03253 Pkinase 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03253 - - mtr:11423982 209.534