Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03252 ATGTGGTTGCAAAAAAATTATGAGGATGTTCATCTCCAATTCACATGCCATGCTGCTACAACATGGAAAATTGATAAAGAGAAAGAGCCATTAAGCATTAATGTTGCAACATTTCAGAGGCAATTGAGAGAGCTTAAATTCTCACAGTTGATTGAAGCAACCAATGGCTTCTCAGCAGAAAGCCTCATTGGTTGTGGTGGTTTTGGTGAAGTGTTCAAGGCCACACTCAAAGACGGAACATGTGTCGTGATAAAGAAGCTCATTCGACTGAGTTGCCAAGGCGATAGAGAATTCATGGCTGAGATGGAAACCTTAGGAAAAATCAAGCATAAAATCCTTGTCCCTTTATTGGGATACTGCAAAGTAGGAGAAGAGAGGCTACTTGTTTATGAATACATGGAATATGGAAGCCTAGAAGAGATGCTCCACGGAAGAATAAAGACACATGATCGACGAATTTTAACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCTAAAGGACTTTTTTTTCTACATCATAATTGCATCCCTCACATCATATATACACAGAGACATGAAGTCAAGCAATGTACTACTTGA 585 0.3949 MWLQKNYEDVHLQFTCHAATTWKIDKEKEPLSINVATFQRQLRELKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGTCVVIKKLIRLSCQGDREFMAEMETLGKIKHKILVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTHDRRILTWEERKKIARGAAKGLFFLHHNCIPHIIYTQRHEVKQCTT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03252 194 Gene3D Transferase(Phosphotransferase) domain 1 133 185 - -
Mepo5g03252 194 Gene3D Phosphorylase Kinase; domain 1 16 132 - -
Mepo5g03252 194 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Mepo5g03252 194 FunFam serine/threonine-protein kinase BRI1-like 2 18 132 - -
Mepo5g03252 194 ProSiteProfiles Protein kinase domain profile. 57 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03252 194 SMART tyrkin_6 57 194 IPR020635 GO:0004713|GO:0006468
Mepo5g03252 194 Pfam Protein tyrosine and serine/threonine kinase 60 180 IPR001245 GO:0004672|GO:0006468
Mepo5g03252 194 SUPERFAMILY Protein kinase-like (PK-like) 38 182 IPR011009 -
Mepo5g03252 194 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 30 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03252 Mepo-Chr5 39664755 39665339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03252 18 183 Receptor kinase-like Gene Family AT1G55610 66.867 1.85e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mepo5g03252 PK_Tyr_Ser-Thr 1.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03252 - - mtr:120577570 330.872