Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03244 ATGCTCCAATTTGGCAATTCAATGAGGTACTTTCACTTTCATCTTTTGTTTCTTTCATGGTTTTTCTTGTTCATTTCAAATAGTCATGAGTTAGAACAAGATCAAAGTCAAACCTTGTTACAATTAAGAGCTTATTTAGAATTCCCTTCTTCATTACAAATTATGGAAAACTATAATAATGACCTATGTTACCTTCCTTCATCTTCAAATTTGAGCATTAAATGTGAAGATAATTCAATAACTGAGCTCAAAATTTTTGGTGAAAAATCTTTGAAACCATCAAGTTTCAATGGATTTGCAATTCCAAATCAAACACTATCCATGAATTTCTCAATTGGTTCATTTTTCACCACATTGACAAAGTTGAAAACCCTAAAGGTTCTTACTTTGGTTTCTTTAGGAATTTGGGGGAAACTTCCTAATAAGATTCAATCTCTCACTTTTCTTCAAGTTTTTGATTTGAGCTCAAATTTCCTATTTGGTACCATTCCACCAAAAATCTCAACTATGGTAAAGCTTCAATCACTAACCCTTGATGAAAATTATTTCAACACCACTATACCTAATTGGTTTGATTCTTTGTTTAACTTAAGTATCTTGAGTTTGAAGAAAAATCACTTAAAGGGTTCATTTCCAATTTCACTATGCAAAATCAAGACACTTAAAGTTATTTCCTTGTCACAAAATGAACTCTCTGGTGAATTGCATAGTCTCACTACTCTCAATGGTTTACATGTTTTGGATTTGAGAGAAAATCGTTTCGAATTTGAACTACCGGTTCTGCCGAAATTCGTGGTCACGGTTTTGTTTAGCAATAACTCGTTCTCCGGAGAGATACCGAAGGAGTTTGGTGAATTGAATCATCTTCAACATTTAGATCTTTCGTCGAATCATCTGAAAGGCACACCACCTTCAACATTGTTCTCTTTGTCAAATTTAAGTTATTTGAATCTAGCAAACAATGTACTAAGTGGAGAATTTTCTGATAAACTTCGTTGCGGTGGAAAACTTGGTTATGTTGATATTTCAAGCAACAAGTTAAGAGGTTTACTTCCATCTTGTTTGGTGAATAGTTCTAATGGTAGAGTTGTTAGATATGGTAGAAATTGTTTATCTGTTGATTCTCAGAATCAGCAGAGAGGGTCGTACTGTAAGGCATCCGGTTTTGGATGGGTGAAATTGAAGGAATGGAAAGTGGTTGCAGTAGTTGCTATCATTGTTGGATTTGTTCTTGCGGTTTTGGTGTTTGGAGTTTTGTTATGTAAAAAATGTCATTTGATGAAGAAAACTAGAAAGGATGTGTTGCCGAAAATTGTTCAAGATAAATCCACAACCGGTGTTTCATCAGAAGTTCTTGCAAATGCTAGATTTATTTCTCAAGCAGTGAAGTTAGGGACACAAACTACTCCAACCTGTCGACAATTTTCTATTCAAGACTTGAAGGAAGCCACCAAAAACTTCAATCTGTCAACTTGTATTGGTGATGGCTCCATAGGAAAGCTGTATAAAGGTAAACTAGAGAATGGAACTTATGTGGTGACAAGATCTATGGTTCTGTCAAAGAAATGCTCAATTCAAAATCTTAAAGCTAAGTTGGATTACCTGTCAAAGCTTCAACATCCAAATTTGGTTAGTCTTTTGGGTTATTGTATTGATGATGGTGAACAAGATGATTCAAGCACCCAAAAACTTCATCTTATGTATGAATATGTGCCGAATGGTGATTATCATACTCATCTATCAGAATATTCTGCACAAAAAGCACTTAAGTGGCCTGAGAGACTAGCAATTTTGATTGGAGTTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATACCAGGATGTTTTAGCAACCAACTAAAGACAAAGAATATCTTACTTGATGAACACTGCATTCCAAAACTAAGTGACTATGGTATGTCCATCATCAAAGAAGATATCGAAAAGTTTGAGACAAAGAGTGAGAAGAAATCAAAATCATGTCAAAAGACAAAGATGGATAATGATGTTTACAATTTTGGATTCATATTGTTGGAATCACTTGTTGGACCCATTACACGTGACAAAGGTGAAACATTTTTAATTAATGAAAAGGCATCATTTGGAAGTCAAGATGGAAGAAGAAAGATTGTGGATCCAGTAGTGTTGACAACTTGCTCTCAAGAATCATTATCAATTGCAATATCTATAACAACCAAATGTATAGCTCAAGACTCTTCATCTCGTCCTTCTTTTGAAGATGTTCTATGGAACTTACAATATGCAGCTCAAGTTCAAGCTACATCAGATGCAGATCAAAAATCAGATTAA 2313 0.3446 MLQFGNSMRYFHFHLLFLSWFFLFISNSHELEQDQSQTLLQLRAYLEFPSSLQIMENYNNDLCYLPSSSNLSIKCEDNSITELKIFGEKSLKPSSFNGFAIPNQTLSMNFSIGSFFTTLTKLKTLKVLTLVSLGIWGKLPNKIQSLTFLQVFDLSSNFLFGTIPPKISTMVKLQSLTLDENYFNTTIPNWFDSLFNLSILSLKKNHLKGSFPISLCKIKTLKVISLSQNELSGELHSLTTLNGLHVLDLRENRFEFELPVLPKFVVTVLFSNNSFSGEIPKEFGELNHLQHLDLSSNHLKGTPPSTLFSLSNLSYLNLANNVLSGEFSDKLRCGGKLGYVDISSNKLRGLLPSCLVNSSNGRVVRYGRNCLSVDSQNQQRGSYCKASGFGWVKLKEWKVVAVVAIIVGFVLAVLVFGVLLCKKCHLMKKTRKDVLPKIVQDKSTTGVSSEVLANARFISQAVKLGTQTTPTCRQFSIQDLKEATKNFNLSTCIGDGSIGKLYKGKLENGTYVVTRSMVLSKKCSIQNLKAKLDYLSKLQHPNLVSLLGYCIDDGEQDDSSTQKLHLMYEYVPNGDYHTHLSEYSAQKALKWPERLAILIGVAKAVHFLHTGVIPGCFSNQLKTKNILLDEHCIPKLSDYGMSIIKEDIEKFETKSEKKSKSCQKTKMDNDVYNFGFILLESLVGPITRDKGETFLINEKASFGSQDGRRKIVDPVVLTTCSQESLSIAISITTKCIAQDSSSRPSFEDVLWNLQYAAQVQATSDADQKSD 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03244 770 ProSiteProfiles Protein kinase domain profile. 487 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03244 770 SUPERFAMILY L domain-like 55 375 - -
Mepo5g03244 770 Gene3D Transferase(Phosphotransferase) domain 1 571 770 - -
Mepo5g03244 770 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 104 754 - -
Mepo5g03244 770 SUPERFAMILY Protein kinase-like (PK-like) 468 753 IPR011009 -
Mepo5g03244 770 Gene3D Ribonuclease Inhibitor 32 264 IPR032675 -
Mepo5g03244 770 Gene3D Ribonuclease Inhibitor 265 377 IPR032675 -
Mepo5g03244 770 ProSiteProfiles Leucine-rich repeat profile. 288 309 IPR001611 GO:0005515
Mepo5g03244 770 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 571 770 - -
Mepo5g03244 770 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Mepo5g03244 770 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 265 389 - -
Mepo5g03244 770 Pfam Protein tyrosine and serine/threonine kinase 489 751 IPR001245 GO:0004672|GO:0006468
Mepo5g03244 770 Gene3D Phosphorylase Kinase; domain 1 448 570 - -
Mepo5g03244 770 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03244 Mepo-Chr5 39589549 39593865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03244 15 698 Miscellaneous Gene Families AT5G14210 53.890 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mepo5g03244 PK_Tyr_Ser-Thr 2.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03244 - - gmx:100799183 1074.31