Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03222 ATGGGGGAAGAATTAAGTTTTGTAATGGAAAACACATCAATGAATGAAAACATGGAGGAAGAACTTGAAGAAAGAGATCCAGAAAGAAATCCAATGAATGAACCACTTCTAAAGAGGAATAGAACACTTTCTTCAAATCCACTTGCTCTTGTTGGAGCAAAAGTTTCCTATATAGAAAGCTTAGATTACGAGATCAATGAGAATGATTTGTTCAAGCAAGATTGGAGAAGTAGATCAAGAGGTCAAGTGTTGCAATACATAATCTTGAAATGGTTACTTGCATTCCTTGTTGGACTTCTTACAGGTGTTATAGCTACTCTTATCAATCTTGCTGTTGAGAATATTTCAGGGTATAAACTCCTTACTGTTGTTGGATACATTCAACAAGAAAGGTACTTGATGGGATTTCTATATTTCTTGGGCACTAATTTCTTGTTGACATTCATTGCTTCAATTCTGTGTGTTTGTTTTGCTCCAACTGCTGCTGGACCAGGAATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACTCCAAACATGTATGGTGCTACAGTTTTGTTTGTTAAGATAATTGGAAGCATAGGAGCTGTTTCAGCAGGTCTAGACTTAGGAAAAGAAGGTCCATTAGTACACATAGGAAGCTGCATTGCTTCCTTACTAGGCCAAGGAGGTCCTGACAATCATAGAATCAAATGGAAATGGGTAAGATACTTCAACAACGATCGCGACCGTCGCGATCTAATAACGTGCGGAGCTTCATCGGGGGTTTGCGCGGCTTTCCGAGCTCCGGTTGGTGGCGTTCTCTTTTCTCTTGAAGAGGTTGCAAGTTGGTGGAGAAGTGCTCTTTTATGGAGAACATTTTGTAGCACAGCTGTTGTTGTGGTTGTTCTTAGGGCATTCATTGAACTTTGTCATGAAGGAAAATGTGGTCTTTTTGGTGAAGGTGGTTTGATTATGTTTGATGTTAGTAATGTTGCTGTGAGTTATAATGTTATGGATATTGTTCCTGTTGCTATTATTGGAATCATTGGTGGTCTCTTGGGAAGTCTTTATAACTATCTTCTTCATAAGATCCTTAGGGTCTATAATCTCATCAATCAGAAAGGAAAAATATACAAGCTTCTTCTAAGTCTCGCAGTATCAATCTTCACATCATTATGTCAATATGGTCTTCCCTTCCTAGTAAAATGTACACCATGTGATGATCTATCAATATGTCCTACAAATGGAAAATCAGGAAACTACAAACAATTCAACTGTCCAAATGGCCATTACAATGACCTAGCTACTCTTCTACTCACAACAAATGATGATGCAGTTAGAAACATATTCTCAACAAACACACCTCATGAATACCAACCTTTTTCAATCTTGATATTTTTCACACTATATTGCATATTAGGTTTAATCACTTTTGGTATTGCAGTTCCATCAGGACTTTTTTTACCTATCATATTAATCGGTTCGGGTTATGGACGCCTCCTCGGAATCCTAATGAAACCTTACACAAATATTGATCATGGTTTGTTAGCTGTTCTTGGTGCAGCTTCCTTGATGGCAGGGTCAATGAGAATGACTGTTTCACTTTGTGTTATTTTTCTTGAACTTACCAACAATCTTCTTTTGTTACCAATAACAATGATTGTTCTTCTCATAGCCAAAACCGTTGGAGATAGTTTCAATCCAAGTGTGTATGAGATGATACTTCATTTGAAAGGTTTACCTTTTATGGATGCTGATCCCGAACCGTGGATGAGAAATTTATCGGTTGGAGAACTTATCGATGTTAAATCATCGGTCGTTAGTTTTCGCGGCGTGGAAAAGGTTGCTAACATTGTAGATGCCTTGAAGAACACTACACATAATGGTTTTCCTGTGATGGATGATGGTGATGAAGTTGAGATAGTAAAATTGCATGGAGTGATTTTAAGAGCACATTTGATAAAAGTGCTCAAGAAAAAGTGGTTTTTGAAAGAGAAAAGAAGGACTGAGGAATGGGAAGTTAGGGAGAAATTTAGTTGGGTTGAGTTGGCTGAGAGAGAAGGAAATATTGAAGATGTTGTTGGTGTTACTAAAGAAGAAATGGAAATGTTTGTTGATCTTCATCCTCTTACTAATACAACTCCGTTTACCGTGTTAGAGAGTATGTCGGTAGCAAAAGCCCGGATTCTTTTCAGACAAGTCGGACTTCGTCATATGCTTGTTGTACCGAAGTATCAAGCGTCCGGGGTATCTCCTGTAATTGGGATCTTGACAAGGCAGGATCTACTTGCCTACAATATTCTATCAGTCTTTCCTCACTTGGCAAATTCTAAGGGCAGAGAAAAGAGCAATTGA 2340 0.3808 MGEELSFVMENTSMNENMEEELEERDPERNPMNEPLLKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKQDWRSRSRGQVLQYIILKWLLAFLVGLLTGVIATLINLAVENISGYKLLTVVGYIQQERYLMGFLYFLGTNFLLTFIASILCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATVLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWKWVRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVASWWRSALLWRTFCSTAVVVVVLRAFIELCHEGKCGLFGEGGLIMFDVSNVAVSYNVMDIVPVAIIGIIGGLLGSLYNYLLHKILRVYNLINQKGKIYKLLLSLAVSIFTSLCQYGLPFLVKCTPCDDLSICPTNGKSGNYKQFNCPNGHYNDLATLLLTTNDDAVRNIFSTNTPHEYQPFSILIFFTLYCILGLITFGIAVPSGLFLPIILIGSGYGRLLGILMKPYTNIDHGLLAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSVYEMILHLKGLPFMDADPEPWMRNLSVGELIDVKSSVVSFRGVEKVANIVDALKNTTHNGFPVMDDGDEVEIVKLHGVILRAHLIKVLKKKWFLKEKRRTEEWEVREKFSWVELAEREGNIEDVVGVTKEEMEMFVDLHPLTNTTPFTVLESMSVAKARILFRQVGLRHMLVVPKYQASGVSPVIGILTRQDLLAYNILSVFPHLANSKGREKSN 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03222 779 PRINTS Chloride channel signature 190 209 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g03222 779 PRINTS Chloride channel signature 477 497 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g03222 779 PRINTS Chloride channel signature 254 273 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g03222 779 PRINTS Chloride channel signature 565 579 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g03222 779 PRINTS Chloride channel signature 527 546 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g03222 779 PRINTS Chloride channel signature 509 525 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g03222 779 PRINTS Chloride channel signature 159 176 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g03222 779 Pfam CBS domain 708 760 IPR000644 -
Mepo5g03222 779 Pfam CBS domain 600 653 IPR000644 -
Mepo5g03222 779 CDD CBS_pair_voltage-gated_CLC_euk_bac 598 760 - -
Mepo5g03222 779 Pfam Voltage gated chloride channel 147 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g03222 779 SUPERFAMILY CBS-domain pair 583 760 IPR046342 -
Mepo5g03222 779 CDD ClC_6_like 59 578 - -
Mepo5g03222 779 SMART cbs_1 600 653 IPR000644 -
Mepo5g03222 779 SMART cbs_1 709 762 IPR000644 -
Mepo5g03222 779 PRINTS Plant CLC chloride channel signature 275 283 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo5g03222 779 PRINTS Plant CLC chloride channel signature 289 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo5g03222 779 PRINTS Plant CLC chloride channel signature 307 314 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo5g03222 779 PRINTS Plant CLC chloride channel signature 64 72 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo5g03222 779 PRINTS Plant CLC chloride channel signature 429 445 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo5g03222 779 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 16 763 - -
Mepo5g03222 779 FunFam Chloride channel ClC3 82 405 - -
Mepo5g03222 779 Gene3D - 604 748 IPR046342 -
Mepo5g03222 779 Gene3D Clc chloride channel 82 580 - -
Mepo5g03222 779 SUPERFAMILY Clc chloride channel 68 580 IPR014743 -
Mepo5g03222 779 ProSiteProfiles CBS domain profile. 706 771 IPR000644 -
Mepo5g03222 779 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03222 Mepo-Chr5 39335627 39340961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03222 3 774 Ion Channels AT3G27170 74.487 0.0 1189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03222 K05016 - gmx:778094 1299.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00771 3 10819506 10824787 Mepo5g03222 5 39335627 39340961 PCT