Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03214 ATGGCTTCGCTCTCACAAGAAACCATAGCAAGACTAAAAGAATACAACTATTCTCCACTCATATTCAGGACTGAACGTGAAGCCACTTTGATGCTACAACATCTTGATAAATATCGAGATCTTAACAATAATCATGTAGGAGCAACGTTGAATAATGCTCTCCAACAACAACAACAACAACTAGGAGCAACGTGGAATACTTTGCAACAAGTACTCCAATTCAGACAACAGCAACAATTCCAACTTATACAGCAGAAGCGTCTTAACAGTATGGTTCCACAAAAGGATGGGAAGAAAATAAAGAAGAATGCAGCTGAAGTAATTCCACCTGTCTTACCACAATACATCAACAAGCTCTATGGTGTTTCACAACCTGGCAGTAGTGCTAATTTTGTCCCCGCTGTTGTCCCCCCTATTAACAACAATGCGAGCAAGATTGGAAATAATGCACCGATTAACTCCAACGTGAGCAAGATTGAAAATGGCACACCTATTAACAACAATGTGAGCAATACTGGAAATAATGCATCTACTAACAACAATTGGAGCAATACTAGAAATTATTCTTCCCAATTTACTAACATATGGGATAGAGCTACAAATAATAAATGTGTGGATGACCTGCGTGGTCCTGATGGTCAACTTCCTGAGAAGTTGAGGAATGTAACACCTCGCCACATTGAACATGTCAGCAACGAGATTATGATTAAAAATCCCAATGTCCTGTGGGATGATATTGCTGGATTGACCCATGCCAAAAAATGTGTCAATGAGATGGCCATATATCCTCTGCGACGTCCTGACTTATTTATGGGCTGCCGTTCTCCTGGGAAAGGTCTGCTGCTTTTTGGTCCACCAGGAACTGGTAAAACAATGATTGGAAAAGCCATAGCTGGGGAGGCAAAGGCCTCCTTCTTTTACATATCTGCAAGCTCGGTGTCTAGCAAATGGTTTGGTGAAGGTGAAAAGCTAGTAAGAGCCCTCTTTGGAGTGGCCAGTTGTCGTCAGCCAGCAGTAATTTTTGTTGATGAAATAGATTCGCTCTTGTCTCAGCGAATGTCAAATGGTAACGAGCATGAAGCATCTAGACGTATCAAGACACAATTTCTTATCGAAATGGAAGGCTTTGACGGTGGTGACGAGCAAGTCCTGGTTATTGGCGCAACAAATCGTCCCCAAGATCTTGATGAAGCAGCACGAAGGAGACTTACTAAACGACTATACATCCCCCTACCATCCTCAGAGGCAAGAGCTTGGATTGTACGTAACCTTTTAGAGAAGGATGGCTTATTCAAGATATCAAATGAGGAAATGGAGATTATATGCAACTTAACAGAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGTCCATTAAGAGAGGCAATGGAACAAGGTATAGATATTATGGAGTTGAAAAAAGAGGATATGAGGCCAGTAACTCTTCAGGATTTCAAGAATTCCCTGCAAGAGATAAGGCCTTCTGTTTCACCTAATGAACTTGGCACTTTTGAGCAATGGAACAAGCAATTTGGAACCCTAGCAGTTTAG 1569 0.4136 MASLSQETIARLKEYNYSPLIFRTEREATLMLQHLDKYRDLNNNHVGATLNNALQQQQQQLGATWNTLQQVLQFRQQQQFQLIQQKRLNSMVPQKDGKKIKKNAAEVIPPVLPQYINKLYGVSQPGSSANFVPAVVPPINNNASKIGNNAPINSNVSKIENGTPINNNVSNTGNNASTNNNWSNTRNYSSQFTNIWDRATNNKCVDDLRGPDGQLPEKLRNVTPRHIEHVSNEIMIKNPNVLWDDIAGLTHAKKCVNEMAIYPLRRPDLFMGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKASFFYISASSVSSKWFGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRMSNGNEHEASRRIKTQFLIEMEGFDGGDEQVLVIGATNRPQDLDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLFKISNEEMEIICNLTEGYSGSDMKNLVKDASMGPLREAMEQGIDIMELKKEDMRPVTLQDFKNSLQEIRPSVSPNELGTFEQWNKQFGTLAV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03214 522 Pfam Vps4 C terminal oligomerisation domain 483 518 IPR015415 -
Mepo5g03214 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 517 IPR027417 -
Mepo5g03214 522 FunFam Fidgetin-like 1 239 422 - -
Mepo5g03214 522 FunFam Fidgetin like 1 412 498 - -
Mepo5g03214 522 Pfam ATPase family associated with various cellular activities (AAA) 280 411 IPR003959 GO:0005524|GO:0016887
Mepo5g03214 522 Gene3D - 412 498 - -
Mepo5g03214 522 ProSitePatterns AAA-protein family signature. 383 402 IPR003960 GO:0005524|GO:0016887
Mepo5g03214 522 Gene3D - 239 514 IPR027417 -
Mepo5g03214 522 Pfam AAA+ lid domain 444 474 IPR041569 -
Mepo5g03214 522 SMART AAA_5 276 413 IPR003593 GO:0016887
Mepo5g03214 522 PANTHER AAA DOMAIN-CONTAINING 81 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03214 Mepo-Chr5 39291252 39295838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03214 233 520 Calmodulin-binding Proteins AT3G56690 32.192 2.71e-41 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03214 K22766 - gmx:100789161 547.74