Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03213 ATGGAAGAATCAGCGAAAAAGTGTTGTTGGAGAAAAGAAGCAGATTCAAATCTGAAGCGACTTCACTCTCTCTTGTTCGGTGTTGAAAACCACCGCGATGCCGATGATTACTCTTCCGCTTACATTCTCTCTCTTCGTCTTCTCGGTTTTCTCGATTCTCGTTCTCATTCTGAAACCGATGAAGCTTTCATTCAACACATTCGGACTCAAGCTTTATCTTACCTTCATACCGCAAGAAAATCTCTTACTCCGATAGTTAATCGCCGAGCTTTTGAGCAAGCAAAAAGGTCTCCAGAGCCTGTTTTTAACACAACAGGAGATATTGATATTGACAAGATACGGAATTCTAAATACTTTCAAGCGCTTATCAATCCATCTAAAGAAAAAGATTGCAAACAATTGGTTGATCAACTGGGGAAGCAAAACAAGACTGGAAGGGAAGCATCAAAGGAAGTAGTGCAAGCTAAGTTAACATCTGTGTATGGAAAAAGCAGCTTGAGGACTAGCAATGGTTCCAAAAGTTTTTTCAACTTGAAAAATAACAGCTCTGAGGACTGCACAATTATTGGAAGGTCTCAATCACATCCCATCCATACAAAGGGTCCTGGTGTCTCGTCTGTTTTTGAAGTTGAAAGAGAAGAAAGAAATTGTCGAAACACTTTTTCGATAAAACGTGCACACGCGGAAAACAATAGCCCCAAAGTTGGTTATTTCAAGACACCATCAAGCAAGGAGGAAGTTAATCCCGATATTGCTGGCAATGAATTTGTTACTGCCAGAACGAAGTTGGAAATGGAAGCAAAGCAAAAGCGAGGTGCTATGGGTTCACCCGGTGCACCTGTCTCACCACAATGCGACAACAATCCTGCTAACAGGCTATACGGTGGGAGATCATATGGTGTTTCACGACGAGGCGTCCGTGGTAATTTTGTCCCCCCTATTAAATCCAATGGGAGCAATATTGGAAATATGACTTCCCGAATAGCTGGCAACAAGGGTGATGATTCTTTAGATGAGTCTACAAAGAAATGTTTGGAAATCCTGTGTGGTCCTGATGGTGAACTTCCTGAGAAATTGAGGAATTTAGAACCTCGCCTCATTGAACATGTTAGTAACGAGATAATGGATAAAGATCCCAATGTACACTGGGATGACATTGCTGGATTGGAGCATGCCAAAAGTTGTGTCAATGAGATGGTCATATTTCCTCTGCTACGTCCTGACTTATTTATGGGCTGCCGTTCTCCTGGGAGAGGTCTGCTTCTATTTGGTCCACCAGGAACTGGTAAAACAATGATTGGAAAAGCCATAGCTGGGGAGGCAAAGGCTACCTTCTTTTACATATCTGCAAGCTCATTGACTAGCAAGTGGATTGGCGAAGGTGAAAAGCTAGTAAGAGCCCTCTTTGGAGTGGCAGGTTGTCGTCAGCCAGCAGTAATTTTTGTTGATGAAATTGATTCGCTCTTGTCTCAGCGCAAGTCAGATGGTGAGCATGAATCAAGTAGACGGCTAAAGACACAGTTTCTTATTGAAATGGAAGGCTTTGACAGTGGTAACGAGCAAGTTCTTCTTATAGGAGCAACAAATCGTCCCCAAGAACTTGATGAAGCAGCACGGAGGAGACTTACTAAACGACTATACATTCCCCTACCATCCTCAGAGGCAAGAGCTTGGATTGCACGTAGCCTTTTAGAGAAGGATGGATTATTCAAGCTATCAAATGAGGAAATGGATATTATATGCAACTTAACCGAAGGTTATTCCGGATCGGACATGAAAAACTTGGTGAAGGATGCTTCTCTGGGTCCCATAAGAGAGCAAATAAGACAAGGTGCAAAAGTTGTGAACTTGGAAAAGGAAAAGATTAGACCAGTAACTCTTCAGGACTTCAAGATTTCCTTGCAACAGGTGAGGCCTTCAGTTTCACCTAATGAACTTGGCACTTATGAGGAATGGAACAAACAATTTGGAAGCTTAGCAATTTAG 1986 0.423 MEESAKKCCWRKEADSNLKRLHSLLFGVENHRDADDYSSAYILSLRLLGFLDSRSHSETDEAFIQHIRTQALSYLHTARKSLTPIVNRRAFEQAKRSPEPVFNTTGDIDIDKIRNSKYFQALINPSKEKDCKQLVDQLGKQNKTGREASKEVVQAKLTSVYGKSSLRTSNGSKSFFNLKNNSSEDCTIIGRSQSHPIHTKGPGVSSVFEVEREERNCRNTFSIKRAHAENNSPKVGYFKTPSSKEEVNPDIAGNEFVTARTKLEMEAKQKRGAMGSPGAPVSPQCDNNPANRLYGGRSYGVSRRGVRGNFVPPIKSNGSNIGNMTSRIAGNKGDDSLDESTKKCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDKDPNVHWDDIAGLEHAKSCVNEMVIFPLLRPDLFMGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVAGCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGNEQVLLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIARSLLEKDGLFKLSNEEMDIICNLTEGYSGSDMKNLVKDASLGPIREQIRQGAKVVNLEKEKIRPVTLQDFKISLQQVRPSVSPNELGTYEEWNKQFGSLAI 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03213 661 FunFam Fidgetin-like 1 379 561 - -
Mepo5g03213 661 Pfam ATPase family associated with various cellular activities (AAA) 420 550 IPR003959 GO:0005524|GO:0016887
Mepo5g03213 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 656 IPR027417 -
Mepo5g03213 661 PANTHER AAA DOMAIN-CONTAINING 225 658 - -
Mepo5g03213 661 FunFam Fidgetin like 1 551 637 - -
Mepo5g03213 661 SMART AAA_5 416 552 IPR003593 GO:0016887
Mepo5g03213 661 Coils Coil 661 661 - -
Mepo5g03213 661 Gene3D - 379 653 IPR027417 -
Mepo5g03213 661 ProSitePatterns AAA-protein family signature. 522 541 IPR003960 GO:0005524|GO:0016887
Mepo5g03213 661 Pfam Vps4 C terminal oligomerisation domain 623 657 IPR015415 -
Mepo5g03213 661 Gene3D - 551 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03213 Mepo-Chr5 39279267 39286316 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03213 357 660 Calmodulin-binding Proteins AT3G56690 32.362 7.30e-40 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03213 K22766 - gmx:100789161 1013.83