Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03186 ATGGCCACTGTTACTACACAGGCTTCTGCAGCCATTTTCCGGCCATGTGGTTTGAAATCAAGGTTCCTTACTGGTTCTTCTGGTAAGTTGAACAGAGAAGTGTCTATTAGGCCAATGGGTTGTTCACCTTCTGCTTCTTTTAAGGTTGAAGCTAAGAAAGGAGAGTGGTTGCCTGGTTTGGCTTCCCCAGGTTACCTAACTGGCAGTCTTCCCGGAGACAATGGATTCGATCCATTGGGACTCGCAGAAGATCCAGAGAACTTGAAATGGTTTGTTCAAGCTGAGCTTGTGAATGGACGTTGGGCTATGTTAGGTGTTGCAGGGATGTTACTCCCTGAAGTCTTCACCAACATTGGAATCATCAATGTTCCAAAATGGTATGATGCAGGGAAAGAAGAATACTTTGCTTCATCTTCAACACTTTTTGTGATCGAGTTCATTTTGTTCCATTACGTCGAGATTAGAAGATGGCAAGACATTAAGAACCCTGGTAGTGTTAACCAAGATCCTATCTTCAAGCAATACAGCTTGCCGAAGGGTGAGGTTGGTTACCCCGGTGGAATTTTTAACCCTTTGAACTTTGCACCAACTTTGGAGGCTAAAGAGAAGGAAATTGCTAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTTATCATTCAGCACAATGTGACAGGAAAAGGACCATTTGATAACCTCTTGCAGCACCTTTCCGACCCATGGCACAACACCATTGTTCAAACACTGGGTGGCGGCAACTAA 762 0.4436 MATVTTQASAAIFRPCGLKSRFLTGSSGKLNREVSIRPMGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGGN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03186 253 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Mepo5g03186 253 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Mepo5g03186 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 248 IPR001344 GO:0009765|GO:0016020
Mepo5g03186 253 FunFam Chlorophyll a-b binding protein, chloroplastic 63 242 - -
Mepo5g03186 253 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03186 Mepo-Chr5 39002172 39004542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03186 38 245 Chloroplast and Mitochondria Gene Families AT3G61470 53.917 3.49e-75 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03186 K08910 - gmx:100798548 476.092