Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03177 ATGGAAAATGTTTCAGTTTTGTGTAAAGATGAGGATCAGATGGTTTTGCCTCCAGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTATTAGTCATTACCTTTATAAAAAGGTAAATGACATAAACTTTTCTGCTAGGGCCATTGGAGAGGTTGATTTGAACAAATCTGAGCCTTGGGATTTGCCATGTAAAGCCAAAATGGGTGAAAAAGAGTGGTACTTTTTTTGTGTGAGAGATAAAAAGTATCCAACTGGTTTGAGGACTAATAGAGCTACTGAAGCTGGATATTGGAAGGCAACAGGAAAAGATAAGGAGATTTACAGAGGAAAATCTCTTGTTGGAATGAAGAAAACTCTTGTGTTCTACAAAGGAAGAGCACCTAAAGGAGAGAAAAGTAATTGGGTAATGCATGAATATAGACTTGAGGGTAAATTCTCTGTTTACAACCTCCCTAAAACTGCCAAGAATGAGTGGGTGATTTGCAGGGTGTTTAAGAAGAGTTTATCAGGCAAAAAGACATGTCATTCTGGAATAATGAGGTTAGAATCTTTTGGAAATGAAATGAGTTCATCTATTCTTCCACCACTCACAGATTCTTCACCTTATTCCATTGACAAAATCAAATCACCTTACGTGTCCTGCTTCTCCAATCCAATTGAAAGAAACCAAATTGGAACCTTTGATTCCTTTAACAACACCCCTTTTGAAGTTCCTTCAAATCATTCAATAAATCTTCCAAAAAATACACTTTCTATTGGTTCATTTTACTCTACTCAAGGAATTCAAGTTCATCCCTCACCAAATTTGCCATTACATGGTTCTGTTTATAACAATGGATCAAACTTTGATAATCAGCAGCATCCACCTCCTTCAACTGCACCAATTGATCTATCTACCTTATGGAATTACTGA 912 0.3651 MENVSVLCKDEDQMVLPPGFRFHPTDEELISHYLYKKVNDINFSARAIGEVDLNKSEPWDLPCKAKMGEKEWYFFCVRDKKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSVYNLPKTAKNEWVICRVFKKSLSGKKTCHSGIMRLESFGNEMSSSILPPLTDSSPYSIDKIKSPYVSCFSNPIERNQIGTFDSFNNTPFEVPSNHSINLPKNTLSIGSFYSTQGIQVHPSPNLPLHGSVYNNGSNFDNQQHPPPSTAPIDLSTLWNY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03177 303 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Mepo5g03177 303 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 231 - -
Mepo5g03177 303 MobiDBLite consensus disorder prediction 275 295 - -
Mepo5g03177 303 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Mepo5g03177 303 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Mepo5g03177 303 FunFam NAC domain-containing protein 100-like 25 170 - -
Mepo5g03177 303 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03177 Mepo-Chr5 38885884 38888196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03177 14 303 NAC Transcription Factor Family AT5G07680 57.317 8.45e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo5g03177 NAM 4.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03177 - - gmx:100170719 435.261