Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03158 ATGGAGAGTGAGGGGTTTGATTTGAATAATGGTAAGAAGATTGGTGATGGTTTTGTTGATAGAAGTAAAGTGAGGATTTTGCTTTGTGATACTGATTCCAATACCTCTCAAGAAGTTTTTACACTTCTCTTGAGATGCTGTTATCAAGTTATTTCAGTGAAGTCTGCAAGACAAGTAATTGATGCACTGAATGCAGAGAAGGAAACTATAGATCTCATACTGGCTGAAGTTGGCCTTCCGAAGCAGAAGGGCATGAAGATGTTGAAGTACATAGCCCGAGACAAAGAATTGCGCAGGATTCCTATTATAATGATGTCTGCACAAGATGAGGTCTCCGTTGTTGTTAAGTGCTTGAGACTCGGAGCAGCAGATTATCTAGTAAAGCCTTTACGCACAAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGGCGCATGCTTGGACTTGCAGAGAAGAACATGTTAAATTATGACTTTGATCTGGTAGTATCAGAGCCTAGTGATAACAATACAAACAGTACCACCCTGTTCTCTGATGACACCGATGATAAGTCGAAGAGAAGCACTATTCAAGAGACAGGAATATCAGTCCAACAAGAGCAAGAGTCTACTATTGCAATTGCTGCTGCTGTTGAGGAACCTCGAGATGATCATGCATCAGAATGTCAGCCTGATGTCCATGGAGTAGATGATCAGCGAACAGCTTCTTTTTCATCTGGTCCAAAGAAGAGCGAACTAAGGATTGGGGTTAGGGAGTCATCAGCTTTCTTCACATATGTTAAAGCATCAGTGCTAAAGAGAAACCTTGAAGGGATTGTTCAAGCTGATAACAATGCTGTCGCACATGTTAGGATGGAAGTTATGCATCAAGCATGTGCTCAACAAGGGGTTAGTGATCTTGAAGTATGCAAAAGCGGAGAAACTTGTGATAGTCAATCGCAAGATGACTTCCCCAGCAGCAATAGTATACCTGATTCTTTATCTATTGAGAGATCTTGTACTCCACCTGCATCTTTGGAAGCCTCGCAGCAAAACCGTTACGAAGAAGAAAATTTGCATCACAACAGTCTGATGCATCCAAGAAATGGGACCCATTGCTCTGAGCTCGAAATGTCTAACATGCCTGCGCAAAATTTGCATCACAACAGTCTGATGCATCCAAGAAATGGGGCCCATTGTCCTGAGCTTGAAAGATCTAACATGACTGCACAACATGCGTATCCATATTATATGTCATCGGGAGTTAATCATGTTATGATGCCTTCATCGGCGCAAATGTATCAAAAGAATGTCCATGACCTGCAGAATCATGCTGGTACATCTATGATTGCTCACTACAATCATGTTCCACAAGGCGGTCCTCATACCAACGGCATGATGTCCTACCCGTATTACCCAATGAATATGTGTTTACAACCAGGTCAGATTCCTGCAGGTCAGTCATGGCCATCCTTCAGAGGCTCAAGTTCATCGGAAGCAAAGTTAAGTAAAGTTGATAGGAGAGAAGCAGCATTGATTAAATTCAGACAGAAAAAGAAAGAGCGCTGTTTTGATAAGAAAATTAGGTATGTCAATCGGAAACAACTTGCTGAAAGACGGCCTCGTGTGAGGGGACAGTTCGTCAGTAAGTTGAATGGTACTAATGTGGATCTTAATGGACAGACTCCTTCCATTGAATATGATGAAAATGAAGATGATCAGGGAGCTAGAGATTACTCTCCCAGGGATGCTTGA 1740 0.4201 MESEGFDLNNGKKIGDGFVDRSKVRILLCDTDSNTSQEVFTLLLRCCYQVISVKSARQVIDALNAEKETIDLILAEVGLPKQKGMKMLKYIARDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLNYDFDLVVSEPSDNNTNSTTLFSDDTDDKSKRSTIQETGISVQQEQESTIAIAAAVEEPRDDHASECQPDVHGVDDQRTASFSSGPKKSELRIGVRESSAFFTYVKASVLKRNLEGIVQADNNAVAHVRMEVMHQACAQQGVSDLEVCKSGETCDSQSQDDFPSSNSIPDSLSIERSCTPPASLEASQQNRYEEENLHHNSLMHPRNGTHCSELEMSNMPAQNLHHNSLMHPRNGAHCPELERSNMTAQHAYPYYMSSGVNHVMMPSSAQMYQKNVHDLQNHAGTSMIAHYNHVPQGGPHTNGMMSYPYYPMNMCLQPGQIPAGQSWPSFRGSSSSEAKLSKVDRREAALIKFRQKKKERCFDKKIRYVNRKQLAERRPRVRGQFVSKLNGTNVDLNGQTPSIEYDENEDDQGARDYSPRDA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03158 579 ProSiteProfiles CCT domain profile. 503 545 IPR010402 GO:0005515
Mepo5g03158 579 MobiDBLite consensus disorder prediction 310 348 - -
Mepo5g03158 579 MobiDBLite consensus disorder prediction 220 243 - -
Mepo5g03158 579 Pfam CCT motif 503 545 IPR010402 GO:0005515
Mepo5g03158 579 Gene3D - 24 245 - -
Mepo5g03158 579 MobiDBLite consensus disorder prediction 310 347 - -
Mepo5g03158 579 SMART REC_2 24 139 IPR001789 GO:0000160
Mepo5g03158 579 MobiDBLite consensus disorder prediction 543 560 - -
Mepo5g03158 579 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 304 IPR045279 GO:0009736
Mepo5g03158 579 MobiDBLite consensus disorder prediction 541 579 - -
Mepo5g03158 579 ProSiteProfiles Response regulatory domain profile. 25 143 IPR001789 GO:0000160
Mepo5g03158 579 Pfam Response regulator receiver domain 26 137 IPR001789 GO:0000160
Mepo5g03158 579 SUPERFAMILY CheY-like 22 150 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03158 Mepo-Chr5 38675049 38681713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03158 6 578 Response Regulator Gene Family AT5G61380 47.087 3.99e-165 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mepo5g03158 Response_reg 2.4e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03158 K12127 - gmx:100799728 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g03158 5 38675049 38681713 Mepo5g03158 5 38675049 38681713 ECH