Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03138 ATGTCAGAACAAGAATCTGATTCATGGAGCTTCATGTTGGTCTGTTTTTTGATCCTTTTCTCAGGTAAATTAGTTGCTGGAGATTCATTGGAAACAGACAAACAAGTACTATTGAATTTGAAATCCTATTTGGAAAATCAAACAGTTTCTAATAGAGGAGAGTATACAAGATGGAACAAGAGCAATTCAAATCCTTGTGAATGGTCAGGAATATCTTGCAGACAAATCAAAGGTAAAAATAAATGGAGGGTTGTGAGTGTAGATATCTCAGCCAGTGAGATTGCTGGTAAGATGTTTAAGAATTTCTCGAAGTTAAGTGAACTCACACACCTTGATGTCTCAAGGAACACTCTCTCTGGAGAGATTCCTGAGGATGTAAGGAAGTGTAAGAATCTTGTCTATCTTAATTTATCTCATAATATTCTTGAGGGAGAGATGAATTTGACAGGTTTGAGAAAGTTGCAAACATTGGATTTGTCTACGAATAGAATCAAGGGTAAACTTGAGGTGAATTTTCCTGATAATTGTGATGGTTTGGTTACTTTGAATGTTTCGGATAATCGCTTCTTTGGTAGGATTGATAAGTGTTTTAATGAGTGTTCAAAGTTGAAGTATTTGGATTTGAGTACAAATAATCTAAGTGGTGCTTTATGGAATGGAATTTCAAGGTTGAAACAGTTTTCAATTTCTGAGAATTTTCTAAGTGGGATTGTTCCTTCACAAGCTTTTCCAATGAATTGTAGTCTTGAAAAATTGGATCTTTCTGTCAATAAATTTTTTGGTAAACCTCCTAAGGAAGTTGCAAACTGCAAGAATTTAGAGATTCTCAATCTTTCTAGTAACAATTTTAGTGGTGAAATACCTCATGAAATTGGTTCAATTACTCGTCTCAAATCATTGTTCTTGCAGAATAACACCTTCTCAAGAGATATTCCAGATACCCTTCTGAATTTGACCAATTTGTTTATTTTGGATATAAGCAGAAACAAATTTGGTGGTGAGATACAAGAGATTTTTGGGAAATTCAAGCAATTGAAGTTTCTTTTGTTGCACACAAATTTTTATGTTAAAGGATTGAATACATCTGGAATTTTCACATTGACCAATCTTACAAGACTAGAATTAAGTAACAACAACTTTTCAGGTCCATTACCGGCCGAAATTTCTCAAATGTCTGGTCTCATTTTCTTAACATTAAGCAACAACGAATTTAACGGAACTATTCCATCTGAATTAGGAAAGTTGAGTAAATTACAAGCACTTGAACTTTCTTCCAATAGTTTCACCGGAAAAATTCCACCAAGCCTTGGAAATTTGAAGTCTCTCTTGTGGTTAATGCTTGCAAACAATTCATTAACAGGTGAAATTCCGCCCGAGTTAGGAAACTGTTCGAGTTTGTTATGGTTGAACCTTGCAAATAACAAACTCACTGGAAAATTTCCTTCTGAGTTAACCAAAATTGGAAGAAATGCTATGGAAACATTTGAATCAAATCATAAGAACATGGCTGGAGTTGTGGCTGGAAATAGTGAATGCTTATCGATGAGAAGATGGATACCGGCTGATTACCCTCCATTCAGTTTTGTATATAGTATCCTAACCAGAAAAAATTGTAGATCCCTTTGGGATAGATTGCTCAAAGGATATGGAATTTTTCCTATGTGTGCATCTGAACCTTCTACTAGATCATCTCATAAATTTGGTTATGTTCAACTAAGTGGTAACCAAATTAGTGGTGAAATTCCTTCAGAAATTGGAACCATGTTAAATTTCAGTATGTTACATTTAGGCGACAACAAATTCAGCGGCGAATTCCCTCCTGAGATTGGTGGCTTACCACTTATAGTGTTGAATTTGACTAGGAACAAGTTTTCAGGTGAAATTCCTAGGGAAATTGGTAACATGAAGTGTATGCAGAATCTTGATTTGTCTTGGAACAATTTCTCAGGTACATTTCCAACAAGTTTGGTTAATTTGGATGAGCTTAGCAGGTTCAACATCTCATATAATCCTTTGTTATCTGGTACTGTACCATTGTCTGGACATTTACTTACTTTCGACAAAGATTCATATTTAGGTGATACCCTCTTAGATTTTCCAAAATTCTTTGATAACACTTTAGATGGAAAAAACAAAACCCTTCACATGAAAATGAAAAAAAACACAAAATGGTATCTCTGTGTTGCTCTAACTCTAGCTAGTTTGGTTTCTGGACTTCTTTTTCTAATTGTTTATTTCTTGGTGAAAAGTCCATCTTTGGAACAAGGAAAGTTTCTGAAGAATAAAAACCGAAATCATGATGATTTAGTTAGCTATGGATCTTCACAATGGTCATCTGATTCCATCAAGATAATCCACTTGAACAATATAGTTTTCACACATGCCGACATCTTGGAAGCAACAAACAACTTCAAAGAGGAAAGCATCATAGGAAAAGGCGGTTTCGGAACAGTCTACAAAGGAGTTTTTCCAGATGGAAGAGAAGTGGCAGTCAAGAAGCTACAAAGGGAAGGAATTGAAGGCGAAAAAGAATTCAAAGCTGAAATGAAAGTCCTTAGTGGTCAAGAATTTGGTTGGCCTCATCCAAATCTTGTCACACTCTATGGTTGGTGTCTATATGGTTCACAAAAGTTACTAGTTTATGAGTACATAGGAGGTGGAAGTTTAGAAGAACTAGTAACCGATACGAAAAATTTGACATATAAAAGGCGCTTAGAAGTTGCAATCGACGTGGCTAAAGCATTGGTTTATCTACACCATGAATGCTACCCACCAATTGTTCATAGAGATGTGAAGGCTAGTAATGTGTTGCTTGACAAAGAAGGTAAAGCAAAGGTAACTGATTTTGGACTTGCTAGAATTGTCGATGTTGGAGACAGTCATGTGAGTACAATTGTAGCCGGAACTGTTGGTTATGTTGCACCTGAATATGGACAAACATGGCATGCTACAACAAAAGGTGATGTTTATAGTTTTGGTGTGTTGATTATGGAGTTGGCAACTGGGAGAAGAGCTGTGGATGGAGGTGATGAATGTTTGGTTGAATGTGTTAGGCGTGTCATTGGTAGTGGTAAAAATGGATTGAGTAATTTTGGGGTAGTTGGTGGTGTAAATGAGATGTTTGAGTTGCTTCAAGTTGGAGTTAAGTGCACAAATGATTTACCACAACATAGGCCTAACATGAAAGAGGTTCTAGCTATGTTGGTCAAGATATTCAATCTTTATAGAAATTCAAATTATTGA 3243 0.3577 MSEQESDSWSFMLVCFLILFSGKLVAGDSLETDKQVLLNLKSYLENQTVSNRGEYTRWNKSNSNPCEWSGISCRQIKGKNKWRVVSVDISASEIAGKMFKNFSKLSELTHLDVSRNTLSGEIPEDVRKCKNLVYLNLSHNILEGEMNLTGLRKLQTLDLSTNRIKGKLEVNFPDNCDGLVTLNVSDNRFFGRIDKCFNECSKLKYLDLSTNNLSGALWNGISRLKQFSISENFLSGIVPSQAFPMNCSLEKLDLSVNKFFGKPPKEVANCKNLEILNLSSNNFSGEIPHEIGSITRLKSLFLQNNTFSRDIPDTLLNLTNLFILDISRNKFGGEIQEIFGKFKQLKFLLLHTNFYVKGLNTSGIFTLTNLTRLELSNNNFSGPLPAEISQMSGLIFLTLSNNEFNGTIPSELGKLSKLQALELSSNSFTGKIPPSLGNLKSLLWLMLANNSLTGEIPPELGNCSSLLWLNLANNKLTGKFPSELTKIGRNAMETFESNHKNMAGVVAGNSECLSMRRWIPADYPPFSFVYSILTRKNCRSLWDRLLKGYGIFPMCASEPSTRSSHKFGYVQLSGNQISGEIPSEIGTMLNFSMLHLGDNKFSGEFPPEIGGLPLIVLNLTRNKFSGEIPREIGNMKCMQNLDLSWNNFSGTFPTSLVNLDELSRFNISYNPLLSGTVPLSGHLLTFDKDSYLGDTLLDFPKFFDNTLDGKNKTLHMKMKKNTKWYLCVALTLASLVSGLLFLIVYFLVKSPSLEQGKFLKNKNRNHDDLVSYGSSQWSSDSIKIIHLNNIVFTHADILEATNNFKEESIIGKGGFGTVYKGVFPDGREVAVKKLQREGIEGEKEFKAEMKVLSGQEFGWPHPNLVTLYGWCLYGSQKLLVYEYIGGGSLEELVTDTKNLTYKRRLEVAIDVAKALVYLHHECYPPIVHRDVKASNVLLDKEGKAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWHATTKGDVYSFGVLIMELATGRRAVDGGDECLVECVRRVIGSGKNGLSNFGVVGGVNEMFELLQVGVKCTNDLPQHRPNMKEVLAMLVKIFNLYRNSNY 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03138 1080 Pfam Leucine Rich repeat 270 286 IPR001611 GO:0005515
Mepo5g03138 1080 Gene3D Transferase(Phosphotransferase) domain 1 885 1079 - -
Mepo5g03138 1080 Gene3D Ribonuclease Inhibitor 29 175 IPR032675 -
Mepo5g03138 1080 ProSiteProfiles Protein kinase domain profile. 804 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03138 1080 SUPERFAMILY Protein kinase-like (PK-like) 778 1069 IPR011009 -
Mepo5g03138 1080 SUPERFAMILY L domain-like 60 289 - -
Mepo5g03138 1080 ProSitePatterns Protein kinases ATP-binding region signature. 810 833 IPR017441 GO:0005524
Mepo5g03138 1080 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Mepo5g03138 1080 Gene3D Ribonuclease Inhibitor 558 705 IPR032675 -
Mepo5g03138 1080 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 239 335 - -
Mepo5g03138 1080 FunFam Leucine-rich repeat receptor protein kinase MSP1 767 883 - -
Mepo5g03138 1080 CDD STKc_IRAK 810 1071 - -
Mepo5g03138 1080 Gene3D Phosphorylase Kinase; domain 1 768 883 - -
Mepo5g03138 1080 PANTHER UNNAMED PRODUCT 220 1007 - -
Mepo5g03138 1080 Pfam Protein kinase domain 804 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03138 1080 SUPERFAMILY L domain-like 221 677 - -
Mepo5g03138 1080 FunFam Leucine-rich repeat receptor-like protein kinase 884 1078 - -
Mepo5g03138 1080 FunFam Putative LRR receptor-like serine/threonine-protein kinase 342 504 - -
Mepo5g03138 1080 Gene3D Ribonuclease Inhibitor 245 347 IPR032675 -
Mepo5g03138 1080 Gene3D Ribonuclease Inhibitor 351 517 IPR032675 -
Mepo5g03138 1080 SMART serkin_6 804 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03138 1080 Gene3D Ribonuclease Inhibitor 176 244 IPR032675 -
Mepo5g03138 1080 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Mepo5g03138 1080 ProSiteProfiles Leucine-rich repeat profile. 131 152 IPR001611 GO:0005515
Mepo5g03138 1080 SMART LRR_typ_2 415 438 IPR003591 -
Mepo5g03138 1080 SMART LRR_typ_2 151 175 IPR003591 -
Mepo5g03138 1080 SMART LRR_typ_2 367 391 IPR003591 -
Mepo5g03138 1080 SMART LRR_typ_2 294 318 IPR003591 -
Mepo5g03138 1080 SMART LRR_typ_2 105 129 IPR003591 -
Mepo5g03138 1080 SMART LRR_typ_2 439 463 IPR003591 -
Mepo5g03138 1080 Pfam Leucine Rich Repeat 417 439 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03138 Mepo-Chr5 38454799 38459080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03138 418 680 Receptor kinase-like Gene Family AT1G55610 28.782 6.53e-14 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Mepo5g03138 Pkinase 5.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03138 - - gmx:100813425 1614.74