Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03131 ATGACTCCCAAAGAGTGTGGAAGGTTGACGTTTCCTATTTCGTTGAATCAGCTGGGTCCTCGTAATTCTCCGATACAATCCTTCATCAGGAGGGATAGAGAAACTTCATCGTATCTATTGTACTACGGACTGGTGCCATCGGAAAATGAGACTAATAAGCTGTTATTAGCTGCCAAAAAGATAAGGAGGGCAACCGGCACAGACTTCATCATATCTTTGGTTGCAGATGATTTTTCTCGTTCTAGCAATGCCTATGTTGGAAAACTCAAGTCTAACATTTCGGGAACCAAGTTCACTATATACGACATTGACAGCCAACCACCACGCGGAGCTGGAATTCAACCAAATAGCCGGTCCAGTAGGAGATTTCATTCTCGGCAGGTGACTCCAACCAGCATATAA 402 0.4403 MTPKECGRLTFPISLNQLGPRNSPIQSFIRRDRETSSYLLYYGLVPSENETNKLLLAAKKIRRATGTDFIISLVADDFSRSSNAYVGKLKSNISGTKFTIYDIDSQPPRGAGIQPNSRSSRRFHSRQVTPTSI 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03131 133 PRINTS Tubby superfamily signature 85 109 IPR000007 -
Mepo5g03131 133 PRINTS Tubby superfamily signature 69 85 IPR000007 -
Mepo5g03131 133 MobiDBLite consensus disorder prediction 104 133 - -
Mepo5g03131 133 PANTHER TUBBY-RELATED 2 106 - -
Mepo5g03131 133 Pfam Tub family 15 130 IPR000007 -
Mepo5g03131 133 MobiDBLite consensus disorder prediction 110 133 - -
Mepo5g03131 133 SUPERFAMILY Tubby C-terminal domain-like 3 116 IPR025659 -
Mepo5g03131 133 Gene3D Tubby Protein; Chain A 13 132 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03131 Mepo-Chr5 38366181 38367954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03131 3 130 TUB Transcription Factor Family AT2G18280 62.500 1.15e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Mepo5g03131 Tub 3.5e-29 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03131 K19600 - gmx:100798958 210.69