Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03094 ATGAAGATCATGTGTGAAACTAGCAATAATAATATCGGTGTTGTTGCAATTTTAGGTATGGGAGGTGTCGGTAAAACGGCACTTGCACAACTTATTTACAATGATGAAAAAGTTCAAGAGCACTTTGATCTAAAAGTCTGGGTTTGTGTCTCAGAAGATTTCAATACTTTGAGAATAATCAAAACTCTCCTTGATTCTATCACTTCAAAAACATGGAATAGCAATAATCTTGATAGTCTTCGAGTCGAATTAAGGGAAAATCTAAGGGGCAAAAGGCTTGAATGTGGTGGTGACATCTGTAGAAGTGTTCGTCATTTGTCATATAATCAAGATGAATATGACAGTTTCCATAAATTTGAGTCTTTCTACGATCTTAAATGCTTGCAAAGCATCATACCAGTCGGCCCTATCAAAGTGGTTGATGACTTGCTACCCACACTCAAATGTTTGCGCGTTTTATGCCTATCAAAGTATGAGAACATTAACATGCTCCCAAATTCAATTGGAAGTTTGGTGGTGTTGCGGTATCTAGATATCTCTGACACTGGCATCAAACGCTTGCCTGATACAATTTGTAACCTTTACAATTTGCAAACCTTAATTTTATGTAGCTGTAAGAATCTCATTGAGTTGCCAGTACATATCGGAAATTTAATTAATTTACGTCACCTTGACATCAGTGAGACCAACATAAAGGAGCTTCCTATGCAAATTGTAAGGTTGGAGAGCCTTTGGACTCTAACTTGTTTCGTAGTGGGCAAGATACATGTTGGGTTAAGTATCAAAGAGCTAAGAAAATTCCCACACCTACAAGGAAAACTTACCATCATGAACCTACATAATGTCAATGATGCCATGGAGGCATATGATGCTGACTTGAAAAGTAAAGAACATATTGAGGAGTTAGTGCTCGAATGGGGAAAACTAGCTGAAGACTCGCAAATAGAGAAAGATGTGCTTAATGCGTTGCGTTCGTCAATAAATCTGAGAAAATTGGACATTAACTTGTATGGGGGGACAAGCTTTCCAAGTTGGTTGGGAGATTCTTTGTTTTCCAACATGGTGTTTGTTCGCATCACAAATTGTTCATATTGCATGACACTTCCAGCAATGGGGAAGCTACCTTCTCTCAAGGACTTGGTTATTTTTGATATGAGGATGTTGGAGACAATCGGTCCAGAGTTCTATGGCATGACAGGAGGAAGTTCAAACTCTTCATTCCAACCATTTCCATCCTTGGAGACGCTGCATTTTCAAAACATGCCAAATTTAAAGGAGTTAGATAATTGTCCTGAACTGAGGGGACATTTTCTTAGCCTTCTTTCATGCGTAAAGGAAATTAAAATACTAAGTTGTGATCATCTCTTGGCAACACCAGTTACTCTGCATTCACTTTGCTCAATAAATAGAATAAATATTGATGGAGATTTCGATTCTGAGTGGTCGTTGCTTGCGAGTGATTCTCCGTGTCTGCTGCAGTACGTAAGCATATGGAACTGTAGTATGTTACAGTCTCTACCTAAAATGTAA 1530 0.383 MKIMCETSNNNIGVVAILGMGGVGKTALAQLIYNDEKVQEHFDLKVWVCVSEDFNTLRIIKTLLDSITSKTWNSNNLDSLRVELRENLRGKRLECGGDICRSVRHLSYNQDEYDSFHKFESFYDLKCLQSIIPVGPIKVVDDLLPTLKCLRVLCLSKYENINMLPNSIGSLVVLRYLDISDTGIKRLPDTICNLYNLQTLILCSCKNLIELPVHIGNLINLRHLDISETNIKELPMQIVRLESLWTLTCFVVGKIHVGLSIKELRKFPHLQGKLTIMNLHNVNDAMEAYDADLKSKEHIEELVLEWGKLAEDSQIEKDVLNALRSSINLRKLDINLYGGTSFPSWLGDSLFSNMVFVRITNCSYCMTLPAMGKLPSLKDLVIFDMRMLETIGPEFYGMTGGSSNSSFQPFPSLETLHFQNMPNLKELDNCPELRGHFLSLLSCVKEIKILSCDHLLATPVTLHSLCSINRINIDGDFDSEWSLLASDSPCLLQYVSIWNCSMLQSLPKM 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03094 509 Pfam NB-ARC domain 9 92 IPR002182 GO:0043531
Mepo5g03094 509 SUPERFAMILY L domain-like 99 501 - -
Mepo5g03094 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 115 507 - -
Mepo5g03094 509 Gene3D Ribonuclease Inhibitor 135 509 IPR032675 -
Mepo5g03094 509 Gene3D - 1 95 IPR027417 -
Mepo5g03094 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 92 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03094 Mepo-Chr5 38018580 38020290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03094 161 244 WRKY Transcription Factor Family AT4G12020 41.176 3.90e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03094 - - tpra:123915821 495.352