Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03077 ATGAGCAAACCAAGTTCTTCATTGGTTCATCTATCCATTCTCATTGTCACTCTCTTTGTGGCTGAAATCCATGGAAGCAAACAAAGTAGAGCACTTAACAAATTGCAAAAATCCAAGTACAGTACAAACTCACAAATTGATACAAGTCACTTTAAGATACATGAGAATATTGTCCTTGATGCAATGGTTCATTCTCAAGATGGTATGAAAGAGAAAGACAAGATTGAGAAGCTACCAGGGCAACCAAATGTGAAATTCTCTCAATATGGAGGATATGTTACGGTGGACAAAATAGCAGGAAGTGCTTTTTACTATTACTTTGTGGAAGCTCATCATTCTAAAGAAACATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGCTCATCTCTTGCCTATGGAGCAATGCAAGAAGTTGGACCCTTCCGTGTGAACAGTGATGGGAAAACCCTTCACAAAAATAACTATTCATGGAACTATGCTGCAAATGTGTTATTCCTTGAGTCACCAGCTGGGGTAGGATATTCATACTCAAATCAATCATCTGACTATGACACCAATGGGGATAGAAGAACAGCTGCATATAACTATGTTTTTTTAGTGAATTGGTTAGAGAGATTTCCTGAATATAAGAATAGAGATTTCTACATTGCTGGAGAAAGTTATGCTGGTCATTATGTCCCTCAACTTGCACACAATATTCTCTACCATAATAAAAAGGCTAATAGGACAATTATCAACTTCAAAGGAATTATGATTGGGAATGCAGTGATCAATGACGACACAGATGAGCAAGGAATGTACGATTTTCTTGCTACTCATGCAATCATATCAGACCAAACAGCATATAATATCAACAAATTTTGTAATTTCTCATCTACTTCCAATCAAACTACTGAGTGCAGTGAAGCAGCTAGTGAAGTTGATAAGAACACGTTGAATCTTGATATATACAACATCTATGCTCCAGTCTGCGCTAATCACAACCTCACTAACCGTCCCAAGAAGATCTCGGATGTTCTTGATCCATGCAGTGACGATTATGTAGACGCATATTTGAACCGGGGTGATGTTCAGGAGGCCCTCCATGCCAATGTCACCAAGCTCGAGCATGACTGGGAAGCCTGCAGTACTATCATTTCAAACTGGGGGGATAGTCCTACAACAATCATTCCCCTTTTACATGAGCTCCTAAATAATGGATTAAGGGTTTGGATTTTTAGTGGTGATATAGATGGAAGGGTGCCTGTTACTGCAACAAAATATTCCCTTAAAAAGATGAAGCTTCCCATTGAGACAACTTGGTATCCTTGGTTCATAGAGGGAGAGGTTGGTGGCTATGCTGAAATATACAAGGGAGGTCTAACTTTTGCCACAGTGAGAGAAGCAGGACATCAAGTACCAAGTTATCAACCAGCAAGAGCCCTCTCTCTAATCATGCATTTCTTAAATGGCACTCCTCTTCCTATTTCTCAAAGATTATATAACTAA 1494 0.3929 MSKPSSSLVHLSILIVTLFVAEIHGSKQSRALNKLQKSKYSTNSQIDTSHFKIHENIVLDAMVHSQDGMKEKDKIEKLPGQPNVKFSQYGGYVTVDKIAGSAFYYYFVEAHHSKETLPLLLWLNGGPGCSSLAYGAMQEVGPFRVNSDGKTLHKNNYSWNYAANVLFLESPAGVGYSYSNQSSDYDTNGDRRTAAYNYVFLVNWLERFPEYKNRDFYIAGESYAGHYVPQLAHNILYHNKKANRTIINFKGIMIGNAVINDDTDEQGMYDFLATHAIISDQTAYNINKFCNFSSTSNQTTECSEAASEVDKNTLNLDIYNIYAPVCANHNLTNRPKKISDVLDPCSDDYVDAYLNRGDVQEALHANVTKLEHDWEACSTIISNWGDSPTTIIPLLHELLNNGLRVWIFSGDIDGRVPVTATKYSLKKMKLPIETTWYPWFIEGEVGGYAEIYKGGLTFATVREAGHQVPSYQPARALSLIMHFLNGTPLPISQRLYN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03077 497 Gene3D alpha/beta hydrolase 69 328 IPR029058 -
Mepo5g03077 497 FunFam Carboxypeptidase 69 328 - -
Mepo5g03077 497 Pfam Serine carboxypeptidase 80 486 IPR001563 GO:0004185|GO:0006508
Mepo5g03077 497 FunFam Carboxypeptidase 391 486 - -
Mepo5g03077 497 SUPERFAMILY alpha/beta-Hydrolases 77 490 IPR029058 -
Mepo5g03077 497 Gene3D - 391 486 - -
Mepo5g03077 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 73 473 IPR001563 GO:0004185|GO:0006508
Mepo5g03077 497 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Mepo5g03077 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Mepo5g03077 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Mepo5g03077 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Mepo5g03077 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Mepo5g03077 497 Gene3D - 345 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03077 Mepo-Chr5 37860757 37869548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03077 353 489 Calmodulin-binding Proteins AT2G22960 31.387 2.79e-15 72.4