Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03073 ATGTTAACACTATCAGATTATGGAAACATCACCATGCTACCAGATTCAATTGGTAATTTGGTGCAGTTGCAGTATCTTGATCTTTCCTTCACAAGAATCAAAAGCTTGCCTGATACCACATGCAACCTTTACAATTTGCAAACTTTGATTTTATGTGGTTGTTGTGATCTCACTAAATTGCCAATGAATATGGTAAATTTAATAAATTTACGTCATCTTGATATAAGTGGGACTGCTATAAAGGAGTTGCCCATAGGAATTGGTGAACTAGAAAACCTTCAAACCTTAACTGTTTTTGTAGTGGGGAAGGGACAAATAGGGTTAGGTATCAAAGAGCTTAAGAAATTTCCTCACCTACAAGGGAAACTTACCATCAAGAATTTGCATAATGTCATTGATGCCAAGGAGGCACACGATGCCAACTTAAAAAGCAAAGAGAAAATTGAAGAGTTGGAGTTGCTATGGGGTAAACAAAGTGAAGATTCTCTAAAAGTGAAAGTTGTGCTTGATATGTTGCAACCACCAAAATATCTGAAGAGCCTGAAAATTGACTTGTATGGCGGGACAAATTTTCCGAGTTGGTTGGGAAATTCTTTGTTTGCTAACATGGTGTCCCTTTGCATCAGTAATTGTGAATATTGTGTGACACTTCCACCACTAGGTCAGCTACCTTCCCTCAAGGATCTAGAAATATATGGTTTGAAGATATTGGAGACAATTGGCCCAGAGTTCTATTTTGTCAAGAGAGGAGAAGGTTCCAATTCGCCTTTCCAGCCATTTCCGTCCCTTGAGCATATGAAACTTCACAACATGCCAAATTGGAAGGAGTGGTTTCCCTTTGAAGGCAACAATTTTTCTTTTCCTCGTCTTAGGACTTTGAAGTTACATGGTTGTCCTGAACTTAGGCGACATTTGCCAAGTCACCTTTCTTCCATAGAAGAAATTGAAATAGAAGGGTGTGACAATCTATTGACAACACCACCTACTTTGCATTGGCTGTCATCAATAAAGAAAATGAAAATTGCATATCATTGGAGTTTTGATGATCATGCTGAAAGAATCCAGCAAACATTGCTTGAGCGTGATTCTCCGTGTCTTCTACAGAGTATAAAGATCATGATGTGTTTGAGTCTATTTTCTTGGCCTAAAATGATTATGAATAGCACTTGTCTTCAACAATTGGAACTCTATAAAATTCAGTCTCCCGTAGCATTTCCGGTGGATGGCCTACCCACTTCATTGCGGTCACTTATTATTTTTAGGTGTGAAAAGTTTGCATTCATGCCTCCTGAAATGTGGAGCAATTACACATCACTTGAGAGTTTGTATCTACAAAGTAGCTGTTGTGCACTTACATCATTCCCACTTGATGGTTTCCCTGCGCTACAAAGGCTTGACATTAGTGATTGTAAGAGTCTGGATTCAATTTTTATTTTAGAAAGTCCTCCATGTCGGCCATCAAGCCTCCTATCACTTAGTATCGTATCACATAACTCAATTGAATCACTTAAATTCAATGTTCGGATGGACACACTCACTGCTCTTGAAGAGTTGTTTCTTCAATGTTCAAAGTTGTCATTTTGTGCAGAAGTTTGTCTACCTCCCAAATTACAAAAAATTGATATAGTATCCTACATAACAACGCCGCCTGTAACTGAATGGGGTCTACAAGGCCTCACTGCTCTTTCAAGATTGAGTATTGGATGTTGTGATGATATTGTTAACACCTTGTTAAATGAACCATTGCTACCTATCTCCCTTGTAAATCTGACAATCATTTATCTCGACGAAATGAAGTCTTTCGATGGAAATGGACTTCAACACCTCTCCTCTCTCGAAAATCTTGCCATTCTAAATTGTGAACAACTTCAGTCAATTCCAGAAAATTGCCTCCCTTCCTCGCTGAAATCACTTGGATTGTATTATTGTAAAAAGCTTGAGTCATTACCAGAAGACAGCCTCCCTTACTCTCTTAAGAAACTGGACATTTATGGATGCCCATTGTTAGAAGAAAGGTATAAAAGGAAGGAACATTGGTGCAAAATTGCTCACATCCCTGTCATCATAATAAATGACCAAGTCACAATATGA 2091 0.3831 MLTLSDYGNITMLPDSIGNLVQLQYLDLSFTRIKSLPDTTCNLYNLQTLILCGCCDLTKLPMNMVNLINLRHLDISGTAIKELPIGIGELENLQTLTVFVVGKGQIGLGIKELKKFPHLQGKLTIKNLHNVIDAKEAHDANLKSKEKIEELELLWGKQSEDSLKVKVVLDMLQPPKYLKSLKIDLYGGTNFPSWLGNSLFANMVSLCISNCEYCVTLPPLGQLPSLKDLEIYGLKILETIGPEFYFVKRGEGSNSPFQPFPSLEHMKLHNMPNWKEWFPFEGNNFSFPRLRTLKLHGCPELRRHLPSHLSSIEEIEIEGCDNLLTTPPTLHWLSSIKKMKIAYHWSFDDHAERIQQTLLERDSPCLLQSIKIMMCLSLFSWPKMIMNSTCLQQLELYKIQSPVAFPVDGLPTSLRSLIIFRCEKFAFMPPEMWSNYTSLESLYLQSSCCALTSFPLDGFPALQRLDISDCKSLDSIFILESPPCRPSSLLSLSIVSHNSIESLKFNVRMDTLTALEELFLQCSKLSFCAEVCLPPKLQKIDIVSYITTPPVTEWGLQGLTALSRLSIGCCDDIVNTLLNEPLLPISLVNLTIIYLDEMKSFDGNGLQHLSSLENLAILNCEQLQSIPENCLPSSLKSLGLYYCKKLESLPEDSLPYSLKKLDIYGCPLLEERYKRKEHWCKIAHIPVIIINDQVTI 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03073 696 Pfam FNIP Repeat 624 663 IPR008615 -
Mepo5g03073 696 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 375 672 - -
Mepo5g03073 696 SUPERFAMILY L domain-like 369 671 - -
Mepo5g03073 696 Gene3D Ribonuclease Inhibitor 1 363 IPR032675 -
Mepo5g03073 696 SMART LRR_typ_2 20 43 IPR003591 -
Mepo5g03073 696 SMART LRR_typ_2 67 90 IPR003591 -
Mepo5g03073 696 SUPERFAMILY L domain-like 2 346 - -
Mepo5g03073 696 Gene3D Ribonuclease Inhibitor 364 580 IPR032675 -
Mepo5g03073 696 Gene3D Ribonuclease Inhibitor 583 674 IPR032675 -
Mepo5g03073 696 Coils Coil 134 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03073 Mepo-Chr5 37794870 37796960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03073 10 96 WRKY Transcription Factor Family AT4G12020 44.318 4.35e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03073 - - mtr:11415408 897.886