Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03072 ATGCTTGGTGAGGGTACCAATAACAGCAGTGTTGGGTCCAATGATTCCCATACCCGCATGCTGGATCACCAAGGGTTGAAGTGGCACGCCAACGATAACTACTCGGTCGCCCACAGTGCTAATCTTCGGGGAAGAGTCACTCATGCATTGAGTAATGATGCTTTAGCTCATGCTCTGATGGACTATAGTTCTCCGACGTTAGGGCTTGAAAATTTTGAAGAGTGGACGATTGATTTGAGGAAGCTGAACATGGGCGAGGCTTTTGCGCAAGGATCTTTTGGGAAACTCTACCGAGGTACTTACAACGGGGAGGATGTCGCTATCAAAATCTTGGAGAGGAATGCAAATGATGCTCCGTTGATGGAACAACAATTTCAGCAGGAGGTTATGATGCTTTCTACATTGAAGCATCCTAATATAGTTCATTTCATAGGTGCATGTCGTAAACCTATGGTCTCGTGCATCGTTACTGAGTATGCTAAGGGTGGATCAGTTCGACAGTTCTTGAATCAACGCCAAAACCGAGCAGTTCCCCTCAAACAAGCTGTCAAACAAGCTTTGGATGTTGCAAGAGGCATGGCTTATGTTCATGGTCTGGGATTGATTCACAGGGACTTGAAATCTGACAACCTTTTGATTTTCGGTGACAAGTCAATCAAAATTGCTGATTTTGGAGTCGCTCGGATTGAGGTGCACACTGAAGGAATGACTCCCGAGACTGGAACATACCGTTGGATGGCTCCGGAGATGATCCAACATAGGCCTTACACACATAAAGTGGATGTGTATAGCTTTGGGATTGTTCTCTGGGAGCTCATCACTGGGATGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTCAACAGAAATGTCCGCCCAATCTTGCCCGATGATTGTTTGCCTGTTCTTCGTGAAATCATGACAAGGTGCTGGGATCCCAACCCCGATGTTAGGCCACCATTTGCTGAAATTGTCGCAATGCTTGAAAGTGCTGAGATTGAGGTCATGACAACAGTCCGGAAGGCCAGGTTCAGGTGCTGCATAACCCAACCAATGACTGCGGAGTGA 1083 0.4672 MLGEGTNNSSVGSNDSHTRMLDHQGLKWHANDNYSVAHSANLRGRVTHALSNDALAHALMDYSSPTLGLENFEEWTIDLRKLNMGEAFAQGSFGKLYRGTYNGEDVAIKILERNANDAPLMEQQFQQEVMMLSTLKHPNIVHFIGACRKPMVSCIVTEYAKGGSVRQFLNQRQNRAVPLKQAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVHTEGMTPETGTYRWMAPEMIQHRPYTHKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPILPDDCLPVLREIMTRCWDPNPDVRPPFAEIVAMLESAEIEVMTTVRKARFRCCITQPMTAE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03072 360 ProSiteProfiles Protein kinase domain profile. 82 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03072 360 FunFam serine/threonine-protein kinase HT1 162 355 - -
Mepo5g03072 360 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 48 335 - -
Mepo5g03072 360 PRINTS Tyrosine kinase catalytic domain signature 157 170 IPR001245 GO:0004672|GO:0006468
Mepo5g03072 360 PRINTS Tyrosine kinase catalytic domain signature 241 251 IPR001245 GO:0004672|GO:0006468
Mepo5g03072 360 PRINTS Tyrosine kinase catalytic domain signature 260 282 IPR001245 GO:0004672|GO:0006468
Mepo5g03072 360 PRINTS Tyrosine kinase catalytic domain signature 195 213 IPR001245 GO:0004672|GO:0006468
Mepo5g03072 360 PRINTS Tyrosine kinase catalytic domain signature 304 326 IPR001245 GO:0004672|GO:0006468
Mepo5g03072 360 SMART serkin_6 82 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03072 360 Pfam Protein tyrosine and serine/threonine kinase 83 333 IPR001245 GO:0004672|GO:0006468
Mepo5g03072 360 SUPERFAMILY Protein kinase-like (PK-like) 61 333 IPR011009 -
Mepo5g03072 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Mepo5g03072 360 Gene3D Transferase(Phosphotransferase) domain 1 162 355 - -
Mepo5g03072 360 FunFam Serine/threonine-protein kinase isoform 1 72 161 - -
Mepo5g03072 360 CDD STKc_MAP3K-like 89 333 - -
Mepo5g03072 360 Gene3D Phosphorylase Kinase; domain 1 71 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03072 Mepo-Chr5 37784032 37785114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03072 7 360 MAP Kinase Kinase Kinase AT2G24360 76.751 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mepo5g03072 PK_Tyr_Ser-Thr 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03072 - - mtr:11405716 697.967