Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03057 ATGGCGAATTCTCGCCCTTCTAAGCGCCACAAAATCAGCAGGGGGGAGGATGATTATATGCCTGGAAACATTTTAGAGATCGAACTTCATAATTTCATGACATTTGATCACTTAAAATGTAAACCCGGCCCTCGGTTGAATCTCGTAATTGGGCCAAATGGTTCTGGAAAGAGTTCTCTTGTATGTGCTATTGCTCTTGGCCTCTGTGGAGAACCCCAGTTGCTTGGGCGAGCCACAAGTATTCAGGCATTTGTGAAGCGGGGAGAAGATTCTGGGCACATTAAGATTACCTTGAGGGGGGACCATAAAGAGGAGCAAATTACAATTATGCGTAAAATAAACACTAGCAACAAGTCGGAATGGGTTTTAAATGGAAATATTGTGCCCAAAAAGGATGTGGCTGAAACCATTCAGAGGTTTAACATCCAAGTAAATAATTTGACTCAATTTTTACCGCAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCTGTGCAACTTCTGGAAGAGACAGAAAAGGCTGTTGGTGATCCACAACTTCCAGAGCAACATCGTGCACTTATTGACAAAAGTCGTGCACTGAAGCATGTTGAGCTGTCTCTGGAGAAAAATGAAGGAACTTTAAACCAGTTGAAGGAACGTAATGCTGAATTAGAGAAGGATGTTGAACGTGTTCGTCAAAGAGATGAACTTCTTGCCAAGGCCGAATCAATGAAAAAGAAATTGCCATGGCTGAGGTATGATATGAAGCAGGCTGAATATCGTGAAGCTAAGGAGCGTGAGAAGGCTGCAGCAAAGGAGCTTGAGAAGGCGGCAAAATTATTAAATGAACTTAAAGAACCTATTAAGAAACAAAAAGAGGAGAAAGCTGCATTAGATGCAAAGTGCAAAAAGGCTAACAACCGAATAAGTGACAATGCCAAGAAGAGAATGGAACTTATGGAGAAAGAGAATCAATTGGAGGTGGAATTACAAGGGAAGTACAAAGAGATGGACGAGTTGAGGAAGCAGGAAGAAACTCGGCAACAGAAATTAAAAAAAGCTAGGGAGGAACTTGCTGCTGCTGAACTTGAACTTGAGAGTCTAAACCCTTATGAACTTCCCAAGGATGAGATTCATAGACTGAGAGAGGGAATTGTGGAGTTGGATTATTCTGCTAATCAAGCGAGACAGAATAAGTCACAAGCAGAAAGCGAAATAAAGCATAAAAAGTTTTCTTTGATGAAGTGTAAAGAGAGGTTGATGGAAATGAATAATAAAAGTACCAAGTGTTTGCATGCATTGCGAAAATCTGGGGTTGAAAGAATTTTTGATGCTTATAAATGGGTCCAAGAGCATCGCGATGAATTCCACAAGGAGGTTTATGGCCCAGTTTTAGTTGAGGTGAATGTCTCAGATCAATCTCATGCTGGATATCTAGAGGGTCAAGTTGCTTGGTACACTTGGAAGTCTTTCATAACACAGGATCCCCGCGATCGGGACTTCTTGGTGAACAACCTACGGAACTACGATGTACCAGTTTTAAATTATACTGGTCATGATAGCCGAAGAGAGCCGCCTCCTGAAATATCTGCCAATATGCGTGCTCTTGGTATCAACTCTCGTTTGGACCAAATTTTTGATGCTCCTGTTGCTGTCAAGGAGGTGTTGATTAGCCAATCTAATCTTGATCATTCATTTATTGGATCGAAAGAAACTGATCAGAAAGCTGATGGGGTCCCAAAATTGGGAATTACTAGTTTATGGACACCAGAAAATCACTATCATTGGTCTAAGTCTAGATATGGAAATCATGTCTCAGCAGTTGTTGAACAAGTGCAACGCCCTCAACTTCTACTGAATAATTTAAATGTGAGGGACATTGAGGATCTGAGCTCCGAGGAAAGGGAGCTTCATGAACAAATTGCTTCCTTGGAGGAAAGTCTTAAAAAGTTTCAAGACGAGGAAAGAAGCTTTGTCAATCAGGCTGCTAATCTTCGTAAGCAGTTGGAGGACATTCGTTTAGAAGCACAAAATAAGCAAAAAGAGCAACAAGCAATTGTTAGGCGTATTGATCAAAAGAAAAGCAAACTGAAATCGATGGAGGAGCAAGATGATTTAGATACTGAGTTAGCAAAGCTTGTTGATCAGGCAACAAAGTGTAACATTCAACGATTCCATAATGCAATTAAAATTAAGGATCTTCTTGTTGAAGCCGCGGGTTACAGACGAAGTTTTGCTGAACAACGCATGACTTTCATTGAATTTGATGCAAAGATTGGAGAAGCGGAGGCCAGTCTGAAGCAGCATGAAAATTTTGCTCTGCAGGCATCATCACACTTTAATAACTCTAAGAAAGAGGCTGAAGAATGTAGACAGAAGCTTACGGATTTATTAAACTATGCTAAGTCAATTGCCCGGCTTACACCCGCCCTAGAGAAGAAATTTCTTGAGATGCCTACTACAATTGAGGAGTTGGAAGCAGCTATCCAAGATACAACTTCTCAAGCCAATTCAATACTTTTTGTCAATAATAACATATTGGAACAATATGAGGCTCGTCAGAGACAGATAGAAGATCTTGCAAAAAAACTTGATGCTGACAAGAAGGAATCTACAAGGTGTCTAGCTGAATTGGATAACATTAAGGGAAAATGGCTCCCTACACTGAGAAACCTCGTGGCCCAGATAAATGAAACTTTCAGTCAAAATTTTCAACAGATGGCTGTTGCTGGAGAAGTTTCACTAGATGAGCATGATATGGACTTTGATCAATTTGGAATACATATAAAAGTCAAATTCAGAGAAAGTGGACAGCTTGAAGTTCTCAGTGCCCATCATCAATCTGGAGGGGAACGATCAGTTTCAACTATTGTTTATCTTGTTTCACTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATCAATCAAGGAATGGATCCAATAAATGAAAGGAAGATGTTTCAGCAACTAGTGAGAGCAGCAAGCAAGCCAAATACACCACAGTGTTTCTTACTTACCCCAAAGTTGTTACCAGATCTGCAATATAGTGAGGCATGCAGTATATTGAATGTAATGAATGGCCCTTGGATTGAGCAACCCTCAAAGGTGTGGACCGCTGGTGATCGATGGAGTATTATCACTGGACATGTTGGAGAGACAGTTTGTTAA 3159 0.4058 MANSRPSKRHKISRGEDDYMPGNILEIELHNFMTFDHLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIQAFVKRGEDSGHIKITLRGDHKEEQITIMRKINTSNKSEWVLNGNIVPKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALIDKSRALKHVELSLEKNEGTLNQLKERNAELEKDVERVRQRDELLAKAESMKKKLPWLRYDMKQAEYREAKEREKAAAKELEKAAKLLNELKEPIKKQKEEKAALDAKCKKANNRISDNAKKRMELMEKENQLEVELQGKYKEMDELRKQEETRQQKLKKAREELAAAELELESLNPYELPKDEIHRLREGIVELDYSANQARQNKSQAESEIKHKKFSLMKCKERLMEMNNKSTKCLHALRKSGVERIFDAYKWVQEHRDEFHKEVYGPVLVEVNVSDQSHAGYLEGQVAWYTWKSFITQDPRDRDFLVNNLRNYDVPVLNYTGHDSRREPPPEISANMRALGINSRLDQIFDAPVAVKEVLISQSNLDHSFIGSKETDQKADGVPKLGITSLWTPENHYHWSKSRYGNHVSAVVEQVQRPQLLLNNLNVRDIEDLSSEERELHEQIASLEESLKKFQDEERSFVNQAANLRKQLEDIRLEAQNKQKEQQAIVRRIDQKKSKLKSMEEQDDLDTELAKLVDQATKCNIQRFHNAIKIKDLLVEAAGYRRSFAEQRMTFIEFDAKIGEAEASLKQHENFALQASSHFNNSKKEAEECRQKLTDLLNYAKSIARLTPALEKKFLEMPTTIEELEAAIQDTTSQANSILFVNNNILEQYEARQRQIEDLAKKLDADKKESTRCLAELDNIKGKWLPTLRNLVAQINETFSQNFQQMAVAGEVSLDEHDMDFDQFGIHIKVKFRESGQLEVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTAGDRWSIITGHVGETVC 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03057 1052 FunFam Structural maintenance of chromosomes 5 848 1019 - -
Mepo5g03057 1052 Coils Coil 379 399 - -
Mepo5g03057 1052 Coils Coil 247 302 - -
Mepo5g03057 1052 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1043 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Mepo5g03057 1052 Coils Coil 317 358 - -
Mepo5g03057 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 312 IPR027417 -
Mepo5g03057 1052 Gene3D - 846 1021 IPR027417 -
Mepo5g03057 1052 Coils Coil 621 697 - -
Mepo5g03057 1052 Coils Coil 194 235 - -
Mepo5g03057 1052 Pfam RecF/RecN/SMC N terminal domain 24 993 IPR003395 -
Mepo5g03057 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 776 1003 IPR027417 -
Mepo5g03057 1052 Coils Coil 837 864 - -
Mepo5g03057 1052 Gene3D - 23 218 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03057 Mepo-Chr5 37497081 37513098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03057 5 1041 Structural Maintenance of Chromosomes family AT5G15920 61.620 0.0 1289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03057 K22803 - gmx:100778678 1640.94