Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03033 ATGATGATGCTAGTGGAGAAAAATTTCTCATGCATGACCTTGTCAACGATTTGGCTAAAATCGTATCTGGACAAAGCTGTTGCAGGTTCGAATGTGGTGACATCTCTGAAAAGGTTCAGTCATGTTTCATATAATCAAGAAATGTATGACATTTTCACTAAGTTTAGGCCACTCCACAATTTTAAACACTTGCGAAGCTTCCTACCCATTTACCCTAAGTGGGGCTCTTGCATATCCATGAAGATGATTGATGATTTGATACCAACATTCAAAATGTTGCACATGTTATCACTATCAAAGTATTCAAACATCACCAAGCTACCAGATTCAATTGGAAATTTGGTGCAGTTGCGGTATCTAGATATCTCCTTCACTAAAATCAAAAGCCTGCCTGATACAACATGTAACCTTTACAATTTGCAGACCTTGATTTTATCAAATTGCACGACTCTCGCTGAATTGCCTGTACATATTGGAAATTTAGTTAGTTTACGTCACCTTGATATAAGTGGGACTAACATAAGTGAGTTGCCTGTGGAAATTGGGGGACTAGAAAACCTTCAAACTCTCACCCTTTTTTTAGTGGGTAAGAGACATGTAGGGTTAAGTATCAAAGAGCTCGGGAAATTCCCAAACCTACAGGGAAAACTTACCATCAAGAACCTGGATAATGTTGTTGATGCTAGAGAGGCACACGATGCCAACCTAAAAAGCAAAGAGAAAATTGAGGAGTTAGAGCTGATATGGGGAAAACATAGTGAAGATTCGCAAGAAGTGAAAGTTGTGCTCGATATGTTGCAACCACCAATAAATCTGAAGGTGCTTAAAATTGACTTGTATGGCGGGACAAGTTTTCCGAGTTGGTTGGGAAATTCTTTGTTTTCTAACATGGTATCCCTCCGTATCAGTAATTGTGAATATTGTGTGACACTTCCACCCTTAGGGCAGTTATCTTCTCTCAAGGACCTAGAAATATGTGGTATAAAGATGTTGGAGAAATTTGGCCCAAAGTTCTATTATGTCCAGATCGAAGAAGGCTCCAATTCTTCCTTCCAACCATTTCCATCCCTTGAGCGTATAAAATTCGACAACATGCCAAATTGGAAGGAATGGATTCCCTTTGAAGGCCTAAAATTTGCTTTTCCTCGACTTAGAGCTATGGAGTTACGTAATTGTCCAGAACTAAGGGGACATTTGCCTACCAACCTTCCTTCCATAGAAAAAATTGTAATATTAGGTTGTTCTCATCTATTGGAAACACCATCTACTCTGCATTGGTTGTCTTCAATAAAAAAAATGAATATCAATGGGCTTGGTGGAAGGACCCAATGGTGGAAGGACCCAATTGCCATTGCTTGA 1359 0.3922 MMMLVEKNFSCMTLSTIWLKSYLDKAVAGSNVVTSLKRFSHVSYNQEMYDIFTKFRPLHNFKHLRSFLPIYPKWGSCISMKMIDDLIPTFKMLHMLSLSKYSNITKLPDSIGNLVQLRYLDISFTKIKSLPDTTCNLYNLQTLILSNCTTLAELPVHIGNLVSLRHLDISGTNISELPVEIGGLENLQTLTLFLVGKRHVGLSIKELGKFPNLQGKLTIKNLDNVVDAREAHDANLKSKEKIEELELIWGKHSEDSQEVKVVLDMLQPPINLKVLKIDLYGGTSFPSWLGNSLFSNMVSLRISNCEYCVTLPPLGQLSSLKDLEICGIKMLEKFGPKFYYVQIEEGSNSSFQPFPSLERIKFDNMPNWKEWIPFEGLKFAFPRLRAMELRNCPELRGHLPTNLPSIEKIVILGCSHLLETPSTLHWLSSIKKMNINGLGGRTQWWKDPIAIA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03033 452 SMART LRR_typ_2 114 137 IPR003591 -
Mepo5g03033 452 SMART LRR_typ_2 161 184 IPR003591 -
Mepo5g03033 452 Gene3D Ribonuclease Inhibitor 56 443 IPR032675 -
Mepo5g03033 452 SUPERFAMILY L domain-like 41 437 - -
Mepo5g03033 452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 34 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03033 Mepo-Chr5 37104948 37106306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03033 77 199 WRKY Transcription Factor Family AT4G12020 35.484 9.01e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03033 - - mtr:11415408 648.277