Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02998 ATGTGTATCAGTGCACATGAAATAAAAACAAATATTGGAGCAAAATTGACATCCATTTGCACGTTTATTCAAAAACAAAAGCCAATCACGAAAACAGTTTCACTTCAAATTCAGTCCCCGCTAAATAAGTTTAACTTCAATCTTCTTCGAGCAGCACCAACCAGCTCCTTAATACACCCCTACTATTACACACTCCACCCCCTTTCACAAACCCCAAATCTAGGGTTAGGGTTTTGGTTCCTCCGCTTCACAACCATGGAAGCCGCAGTAATCGACGCTGGTTCCAGCCTCCTCAAAGCTGGATTTGCAATTCCCGATCAAACTCCCGCCATGATAATTCCTAGTCAGATGAAACGAATGGTTGATGAAACGAATGATAATGGTAATGGTAATGGTCAGTTGGTGGTGGATGATGTCGCGGTGGAGCCGGTGGTAAGAGGTTATGTTAGAGATTGGGATGCTATGGAGGATTTGTTGAATTATGTTTTGTATAGTGGACTTGGATGGGAAATTGGTAATGAGGGACAAATATTGTTTACGGATCCACTTTGTACCCCAAAGGCTAACAAAGAACAGTTAGTGCAACTTATGTTTGAAACGTTCAACATATCAGGGTTTTATGCCTCGGAACAGGCAGTTTTATCACTCTATGCTGTGGGAAGGATCTCTGGATGCACAGTTGACATTGGTCATGGAAAAATAGATATTGCTCCAGTAATTGAGGGTGCTGTCAACCATATTGCCTCAAGAAGATTTGAGTTTGGAGGTACTGATCTAACTAATTTCCTGGCTCAAGAACTTGGCAAATCCAATCCACTAGTGAATATCAGCATGTCTGATGTTGAGAAAATAAAACAGCAATACTCATGTTGTGCTGAAGATGACTTAGCTTATCAAAAGACAGAAGATTCTTGTCCTGTGGAGACACATACCCTTCCTGATGGACAGGTGATAACAATTGGAAGAGAAAGATATACAGTTGGTGAAGCTTTATTCCAGCCAAGTCTATTGGGTTTAGAGACTCATGGCATTGTAGAGCAGCTTGTGCGTACTATTTCTACCGTGACATCTGATAATCATCGGCAACTTCTTGAAAATACTGTAGTTTGTGGTGGCACTTCTTCTATGACTGGTTTTGAAGAGAGATTTCAGAAGGAATCTTTGCTATGTTCATCTGCCGTTCGACCTACGTTGGTTAAGCCTCCGGAATATATGCCTGAAAATTTAACCATGTATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTTCCTCAAAATCAGCACGTAACTAAGGCAGACTATGATGAAAACGGGCCTTCCATTGTTCACCGGAAATGCTTCTGA 1353 0.4154 MCISAHEIKTNIGAKLTSICTFIQKQKPITKTVSLQIQSPLNKFNFNLLRAAPTSSLIHPYYYTLHPLSQTPNLGLGFWFLRFTTMEAAVIDAGSSLLKAGFAIPDQTPAMIIPSQMKRMVDETNDNGNGNGQLVVDDVAVEPVVRGYVRDWDAMEDLLNYVLYSGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGTDLTNFLAQELGKSNPLVNISMSDVEKIKQQYSCCAEDDLAYQKTEDSCPVETHTLPDGQVITIGRERYTVGEALFQPSLLGLETHGIVEQLVRTISTVTSDNHRQLLENTVVCGGTSSMTGFEERFQKESLLCSSAVRPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHVTKADYDENGPSIVHRKCF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02998 450 Pfam Actin 86 450 IPR004000 -
Mepo5g02998 450 Gene3D Actin; Chain A, domain 4 254 341 - -
Mepo5g02998 450 SUPERFAMILY Actin-like ATPase domain 220 450 IPR043129 -
Mepo5g02998 450 CDD NBD_sugar-kinase_HSP70_actin 89 255 - -
Mepo5g02998 450 Gene3D - 212 413 - -
Mepo5g02998 450 SMART actin_3 86 450 IPR004000 -
Mepo5g02998 450 FunFam Actin-related protein 7 89 216 - -
Mepo5g02998 450 PRINTS Actin signature 189 202 IPR004000 -
Mepo5g02998 450 PRINTS Actin signature 108 117 IPR004000 -
Mepo5g02998 450 PRINTS Actin signature 306 322 IPR004000 -
Mepo5g02998 450 PRINTS Actin signature 214 233 IPR004000 -
Mepo5g02998 450 SUPERFAMILY Actin-like ATPase domain 86 227 IPR043129 -
Mepo5g02998 450 PANTHER ACTIN 89 443 IPR004000 -
Mepo5g02998 450 FunFam Actin-related protein 7 254 341 - -
Mepo5g02998 450 Gene3D - 90 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02998 Mepo-Chr5 36751325 36757929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02998 90 450 Cytoskeleton Gene Families AT3G12110 37.867 4.12e-68 220
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02998 5 36751325 36757929 Mepo5g02998 5 36751325 36757929 ECH