Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02991 ATGTGCGGTGGACCTGACAAATCAAAATCTATTTCAACCTCATCGTCTTCCTCTTCATCTGCGGCTGAAGGTTCAACTTCAAATACTGTCAAAGACATGAAAAATCTAACTGTTCGCACCGATGATTCTTTTTCCAGCTTACTTGAACATGCTTCCAACAATGATTTTGAAGATTTCAAGGTAGCTTTAGATAGTGATGCTTCACTTATTAATGAAGTTGGTTTCTGGTATGTCCGTCAAAAGGGATCTAACCAAATTGTTCTTGAGCACCGAACCCCTTTAATGGTGGCTGCTTCCTATGGGAGTATTGATATTCTAAAGCTTATACTCTCATATCCAGAGGCTGATGTTAATTTCTCCTGTGGGACTGATAAAAGCACTGCTCTTCACTGTGCTGCCTCAAGTGGTTCGGTTAATGCTGTTGATGCGATAAAATTGCTTTTATCAGCTGGCGCTGATATCAATTCTGTGGATGCTAATGGGAAACGCCCTGTGGATGTTATCGTTGTTCCTATTGTTGTTCCTCATAAGCTCGAAGGTGTGAAAACAATTCTTGAAGAACTTCTCTCAGACAGTGCTTCTGAAGGATCTGTGGATGATTGCTCTCTTCCCCTGTCTCTTATTTCATCGAGTCCTGGTTCATCTGCCCCTTTATCATCTGCTGAAAATGGGTCTCCATCCTCTCCTGTGGCTCCAAAGTTTACTGACTCAGCTGTTAATTCTACATCAGAGAAGAAAGAGTATCCAGTTGACCCATCTCTTCCTGACATAAAAAACAGCATGTATGCCACCGATGAATTTCGCATGTACTCATTCAAGGTTCGTCCTTGTTCTCGTGCATACTCTCACGATTGGACTGAGTGTCCTTTTGTGCATCCTGGAGAGAATGCTCGAAGGAGAGACCCTAGAAAGTTTCACTACAGCTGTGTGCCATGCCCTGATTTTAGAAAAGGGGCTTGCAGACGTTCGGATATGTGTGAATATGCTCATGGAGTATTCGAGTGCTGGCTACACCCAGCTCAGTATCGGACAAGGCTTTGCAAAGACGGCATGGGTTGTAACCGAAGGGTGTGCTTCTTCGCTCACTCACCTGAAGAGCTGCGTCCGCTGTATGTGTCCACCGGATCTGCTGTTCCTTCACCCCGGTCAGCTGCTTCTACTGCTAATGTCATGGACATGGCTGCTGCTATGAGCCTTTTCCCTGGTTCACCATCATCAATCTCTTTGATGTCTCAATCTCCCTTTGCACAGCCTCCTCTATCTCCATCTGCAAATGGCAATAATGCTTGGCCACAGCCCAATGTGCCAGCTCTTCATTTACCAGGAAGCATTAATCAAACTAGTCGTTTGAGATCATCTCTTAGTGCCCGTGATATGCCGCCACATGATGACTTCAACAATATGTTGCAAGACTTTGATGGGCAGCAGCAGATACTGAATGACTTGAGCTGTTTCTCACAGCCCCGTCCTGGTGCTATTTCAGTTGGTCGATCTGGCCGACCTAAAACACTAACTCCATCAAATCTGGATGATCTATTTTGTGCTGAGATTTCTTCATCTCCTCGGTATTCTGACCCCGCCACGGCTTCTGTATTTTCCCCAACACACAAATCTGCTGTCTTCAACCAGTTTCAACAGCTCCAAAGCTCCTTATCACCCATCAACACAAATGTCATGTCTCCTACAAATGTCGAGCATCCCCTATTCCACCAGGCGTCATATGGGCTCTCTTCTCCTGGAAGGATGTCACCAAGAAGTATGGAAGCCCTCTCTCCAATGAGTTCTCGGTTGTCAGCTTTTGCTCAGCGTGAGAAACAGCAGCAGCAACAGCTGCGTAGCCTTAGCTCAAGAGAGCTCGGTGGTAACAATCCTGTCTCAGCTGTTGGGTCCCCTGTTAACTCCTGGTCCAAGTGGGGATCATCCCCTATTGGAAAAGCAGATTGGTCGGTAAATCCAAATGACTTCGGTCAAACACAGAGATCCACCTCTTTTGAGCATGGAAATCATGGAGAAGAGCCTGATGTAGGTTGGGTCCATTCCCTTGTCAAGGATCCCACACCTGAGAAGAAAGAGAAGCTTGCAGGTTCTGGCCCGATTCCATCTGCTGAAAAGAATCCCAACCCGCAAGTGGAGGGCATTGATCACTCTGTTTTGGGAGCTTGGCTTGAGCAACTGCAGCTGGATCAACTTGTAGTCTAG 2199 0.462 MCGGPDKSKSISTSSSSSSSAAEGSTSNTVKDMKNLTVRTDDSFSSLLEHASNNDFEDFKVALDSDASLINEVGFWYVRQKGSNQIVLEHRTPLMVAASYGSIDILKLILSYPEADVNFSCGTDKSTALHCAASSGSVNAVDAIKLLLSAGADINSVDANGKRPVDVIVVPIVVPHKLEGVKTILEELLSDSASEGSVDDCSLPLSLISSSPGSSAPLSSAENGSPSSPVAPKFTDSAVNSTSEKKEYPVDPSLPDIKNSMYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRSDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHSPEELRPLYVSTGSAVPSPRSAASTANVMDMAAAMSLFPGSPSSISLMSQSPFAQPPLSPSANGNNAWPQPNVPALHLPGSINQTSRLRSSLSARDMPPHDDFNNMLQDFDGQQQILNDLSCFSQPRPGAISVGRSGRPKTLTPSNLDDLFCAEISSSPRYSDPATASVFSPTHKSAVFNQFQQLQSSLSPINTNVMSPTNVEHPLFHQASYGLSSPGRMSPRSMEALSPMSSRLSAFAQREKQQQQQLRSLSSRELGGNNPVSAVGSPVNSWSKWGSSPIGKADWSVNPNDFGQTQRSTSFEHGNHGEEPDVGWVHSLVKDPTPEKKEKLAGSGPIPSAEKNPNPQVEGIDHSVLGAWLEQLQLDQLVV 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02991 732 MobiDBLite consensus disorder prediction 577 633 - -
Mepo5g02991 732 MobiDBLite consensus disorder prediction 647 712 - -
Mepo5g02991 732 MobiDBLite consensus disorder prediction 665 691 - -
Mepo5g02991 732 PRINTS Ankyrin repeat signature 143 157 IPR002110 GO:0005515
Mepo5g02991 732 PRINTS Ankyrin repeat signature 90 105 IPR002110 GO:0005515
Mepo5g02991 732 SMART c3hfinal6 306 332 IPR000571 GO:0046872
Mepo5g02991 732 SMART c3hfinal6 341 364 IPR000571 GO:0046872
Mepo5g02991 732 PANTHER UNKEMPT FAMILY MEMBER 49 684 IPR045234 -
Mepo5g02991 732 SMART ANK_2a 124 156 IPR002110 GO:0005515
Mepo5g02991 732 SMART ANK_2a 89 119 IPR002110 GO:0005515
Mepo5g02991 732 Gene3D - 307 369 - -
Mepo5g02991 732 ProSiteProfiles Zinc finger C3H1-type profile. 311 333 IPR000571 GO:0046872
Mepo5g02991 732 FunFam Zinc finger CCCH domain-containing protein 66 264 332 - -
Mepo5g02991 732 MobiDBLite consensus disorder prediction 1 33 - -
Mepo5g02991 732 MobiDBLite consensus disorder prediction 7 33 - -
Mepo5g02991 732 Pfam Ankyrin repeats (3 copies) 81 158 IPR002110 GO:0005515
Mepo5g02991 732 MobiDBLite consensus disorder prediction 588 633 - -
Mepo5g02991 732 SUPERFAMILY Ankyrin repeat 36 167 IPR036770 -
Mepo5g02991 732 ProSiteProfiles Ankyrin repeat region circular profile. 124 158 - -
Mepo5g02991 732 ProSiteProfiles Ankyrin repeat profile. 124 159 IPR002110 GO:0005515
Mepo5g02991 732 MobiDBLite consensus disorder prediction 214 252 - -
Mepo5g02991 732 Gene3D - 6 170 IPR036770 -
Mepo5g02991 732 MobiDBLite consensus disorder prediction 214 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02991 Mepo-Chr5 36526891 36531792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02991 1 729 C2H2 Transcription Factor Family AT5G12850 51.656 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo5g02991 Ank_2 1.7e-11 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02991 - - gmx:100792574 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02991 5 36526891 36531792 Mepo5g02991 5 36526891 36531792 ECH