Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02982 ATGCAAATGAGGAAACCTGATTTGATCATGGGAAAAGACAACAACAAAATGAACAACAACATTAACAAAAGCAAGCTAAGGAAAGGGTTATGGTCGCCTGAGGAAGATGAGAAGTTGGTAAGATACATGATAACTAAAGGACAAGGTTGTTGGAGTGACATTGCTAGGAATGCTGGTCTTCAAAGGTGTGGCAAAAGTTGTCGTCTTCGTTGGATTAATTACTTGAGACCTGATCTTAAGCGTGGCGCGTTTTCGCCACAAGAGGAAGAACTCATCATTCATTTCCATTCCATTCTTGGCAATAGATGGTCTCAGATTGCAGCACGTCTACCTGGTCGTACCGACAATGAAATAAAGAATTTTTGGAATTCCACACTGAAGAAGAGATTGAAAACCAACAATAACAACAACTCTACTCCATCTCCAAACAACAGTGACACATCGGATCAACCAATAGATAATGTTTTTGATGTGAAAAATAACATGATCATGCCAATTAATGAACAAGAACTAATGACATTATGCATGGATTCCGCATCATCAACTTCATCATCATCCATGCAATCCATGCACATGCATACCATGGTTTTACCTGACCAATTTGATCCATTTTCCTTGTTGTCTAATAACCGTTATGACATGACAACTTTCCATGCTCATGACTTGCCAAATAGTTGTTTAACACAAGTTGGCAATATGGTTGATGATATTGGGCTTCATAGTGATGATCATTATGGGATTTTGGAGGCTAATAAAATGGGGTTATTAGAAAATGATTTTGAACTTCCTCCACTAGAAAGTAGAATTAGCATTGAAGATAAGAGTGCCCTAATTGGTGATCATAATGTGAAAAGCCATAACAACCACTTCAATAATAGTTGCTTCAATAACACTAATCACATTCAAAACTCCAATGAGGACTTGTTTGGGTTTGGAAATCATGGGCAAGGAGAAAACTTAAAAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGACATATCCTATTTTCCTCCTCTTGATTTCCAAGTTTAA 1035 0.3758 MQMRKPDLIMGKDNNKMNNNINKSKLRKGLWSPEEDEKLVRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKTNNNNNSTPSPNNSDTSDQPIDNVFDVKNNMIMPINEQELMTLCMDSASSTSSSSMQSMHMHTMVLPDQFDPFSLLSNNRYDMTTFHAHDLPNSCLTQVGNMVDDIGLHSDDHYGILEANKMGLLENDFELPPLESRISIEDKSALIGDHNVKSHNNHFNNSCFNNTNHIQNSNEDLFGFGNHGQGENLKMGEWDLEGLMQDISYFPPLDFQV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02982 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 75 IPR017930 -
Mepo5g02982 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Mepo5g02982 344 SUPERFAMILY Homeodomain-like 26 122 IPR009057 -
Mepo5g02982 344 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Mepo5g02982 344 MobiDBLite consensus disorder prediction 130 152 - -
Mepo5g02982 344 Gene3D - 28 80 - -
Mepo5g02982 344 FunFam MYB transcription factor 25 81 - -
Mepo5g02982 344 CDD SANT 83 126 IPR001005 -
Mepo5g02982 344 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Mepo5g02982 344 MobiDBLite consensus disorder prediction 1 21 - -
Mepo5g02982 344 SMART sant 27 77 IPR001005 -
Mepo5g02982 344 SMART sant 80 128 IPR001005 -
Mepo5g02982 344 Gene3D - 82 153 - -
Mepo5g02982 344 PANTHER MYB DOMAIN PROTEIN 55 21 299 - -
Mepo5g02982 344 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Mepo5g02982 344 Pfam Myb-like DNA-binding domain 81 125 IPR001005 -
Mepo5g02982 344 CDD SANT 31 75 IPR001005 -
Mepo5g02982 344 FunFam Transcription factor MYB46 82 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02982 Mepo-Chr5 36444253 36447507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02982 1 344 MYB Transcription Factor Family AT3G08500 45.232 1.09e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo5g02982 Myb_DNA-binding 7.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02982 K09422 - gmx:100813660 415.616