Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02940 ATGGTTCGCTCCAATGGCGTCAAGCTTCTTCTTCGCTCTCTCTCCCCTAATCTCCTCCGCAACAAATCCGTATATGAAGGAGTGTTGCAAAGGGGATATAGAACATTGAATTCAGGATTATGCAATCGTTCTTCCAACGTTACTGGAAATTATTTTCACAATGTTGGAGATAGTGTTAAATTGAAGAACTGGGTGCTATTGGGAGCAGCAAATACTTATTTAGGGGCAACTAGATCCATTCATGGATCAGCACCATTGGCAAAGGACTTTTATGATGTTCTTGGAGTCAGTAAGAATGCAAGTTCTTCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAAAAGTTACATCCTGACACAAACAAAGATGATCCTGAAGCTGAAAAGAAATTTCAAGAAGTTTCAAGGGCATATGAGGTTTTGAAGGACGAGGAAAAGCGTCAAGAGTATGATCAGGTTGGCCATGAAGGTTTTGTAAACCGAGAAAATGGTTCTGGAGATGGTGGCTTTGGTCCCTTTGGAGATGGTGGCTTTCCCTTTAATCCTGATATTATCCACGACATCTTTAATCGGAACATTGGCGGACAGGATGTCAAGACTTTTGTTGAACTTTCCTTTATGGAAGCTGTCCGTGGATGCGCCAAAACCATTACATTTCAAACAGATATGATTTGCAACACTTGTGGTGGGAGTGGGGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGTTGTAAAGGGTCAGGAGTGACATCTGTACAAGCTGGCATATTTAGGATGGAGACTACATGTGGTGCATGTAAGGGATCTGGCAAAATTGTCAAGAGTTTCTGCAAGTCATGCAAGGGTGCAAAGGTTAACAGAGCAACCAAGTCAGTCAAATTGGATATTATGGCTGGGATTGACAACAATGAAACCATTAAGGTTTACAGAAGTGGTGGTGCAGATCCCGAAGGAGATCGACCTGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTCTTCCGTAGAGAAGGATCGGATATTCATGTAGATACTGTTTTAAGCATCACTCAGGCCATTTTGGGCGGAACCATTCAGGTTCCAACTCTTACTGGGGATGTTGTTCTCAAGGTGCGTCCTGGAACACAACACGGTCAGAAGGTGGTTCTGAAACAGAAAGGGATCAAGACCAAAAAGTATAACTCATTAGGCAATCAATACGTTCATTTTAACGTCAGCATCCCAGTAAACCTGACAGATAGACAGCGGGAATTGATTGAAGAGTTTCAGAAAGAAGAGCAATATGAATCTTCCGATAAAGGAAAAGCTGCTTCGGCTTCTGGTTGA 1335 0.4247 MVRSNGVKLLLRSLSPNLLRNKSVYEGVLQRGYRTLNSGLCNRSSNVTGNYFHNVGDSVKLKNWVLLGAANTYLGATRSIHGSAPLAKDFYDVLGVSKNASSSEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSRAYEVLKDEEKRQEYDQVGHEGFVNRENGSGDGGFGPFGDGGFPFNPDIIHDIFNRNIGGQDVKTFVELSFMEAVRGCAKTITFQTDMICNTCGGSGVPPGTRPETCKRCKGSGVTSVQAGIFRMETTCGACKGSGKIVKSFCKSCKGAKVNRATKSVKLDIMAGIDNNETIKVYRSGGADPEGDRPGDLYVTIKVREDPVFRREGSDIHVDTVLSITQAILGGTIQVPTLTGDVVLKVRPGTQHGQKVVLKQKGIKTKKYNSLGNQYVHFNVSIPVNLTDRQRELIEEFQKEEQYESSDKGKAASASG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02940 444 CDD DnaJ_C 196 414 - -
Mepo5g02940 444 Pfam DnaJ C terminal domain 201 411 IPR002939 -
Mepo5g02940 444 PRINTS DnaJ domain signature 91 109 IPR001623 -
Mepo5g02940 444 PRINTS DnaJ domain signature 109 124 IPR001623 -
Mepo5g02940 444 PRINTS DnaJ domain signature 146 165 IPR001623 -
Mepo5g02940 444 PRINTS DnaJ domain signature 126 146 IPR001623 -
Mepo5g02940 444 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 212 287 IPR036410 -
Mepo5g02940 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 195 333 IPR008971 GO:0006457|GO:0051082
Mepo5g02940 444 Gene3D - 200 327 - -
Mepo5g02940 444 Pfam DnaJ domain 89 151 IPR001623 -
Mepo5g02940 444 SUPERFAMILY Chaperone J-domain 88 181 IPR036869 -
Mepo5g02940 444 CDD DnaJ_zf 225 285 IPR001305 GO:0031072|GO:0051082
Mepo5g02940 444 Gene3D - 225 285 - -
Mepo5g02940 444 Gene3D DnaJ domain 86 199 IPR036869 -
Mepo5g02940 444 ProSiteProfiles dnaJ domain profile. 89 154 IPR001623 -
Mepo5g02940 444 FunFam Molecular chaperone DnaJ 217 290 - -
Mepo5g02940 444 CDD DnaJ 89 143 IPR001623 -
Mepo5g02940 444 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Mepo5g02940 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 422 IPR008971 GO:0006457|GO:0051082
Mepo5g02940 444 SMART dnaj_3 88 146 IPR001623 -
Mepo5g02940 444 Pfam DnaJ central domain 225 285 IPR001305 GO:0031072|GO:0051082
Mepo5g02940 444 Hamap Chaperone protein DnaJ [dnaJ]. 86 440 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mepo5g02940 444 ProSiteProfiles Zinc finger CR-type profile. 212 290 IPR001305 GO:0031072|GO:0051082
Mepo5g02940 444 FunFam Chaperone protein dnaJ 1, mitochondrial 332 439 - -
Mepo5g02940 444 Gene3D - 332 441 - -
Mepo5g02940 444 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 45 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02940 Mepo-Chr5 35878104 35887873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02940 91 151 C2H2 Transcription Factor Family AT1G74250 43.939 2.08e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02940 K03686 - gmx:100784630 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02940 5 35878104 35887873 Mepo5g02940 5 35878104 35887873 ECH