Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02900 ATGGCTGCCATCCGAGTCCTCTCTACAGATACAATAAAGGCACCAAATTCAACTGATGAAAAAATTGATCTTACTCCATGGGATCTCAAGAATCTACTTGTTGAACACACCCAAAAGGGTCTCCTTTATCACCATCCTATAGAGTCGAACCAAATTCGACACCTAAAACACTCTCTATCTTCTGCTCTTGCCTTTTTCCCACCACTTGCAGGCCGTCTAGAAATAATAGACCATAAAGACAACACCATGTCGTGTTCCGTCATATGCAACAATGCAGGTGTACTCTTTGTCCATGCTGCAACTGAGAACACTAGTGTAGGTGACATACTTGGATGCACCTATATTCCTCCCATTCTCAATTCATTTTATCCATTGAATGGAATCAAAAACTACGAAGGTACGTCACAACCATTGCTTGCCGTGCAAGTGACAGAGTTAGTTGACGGCATCTTTATTGGTTTTACTTTTAACCATCAGGTTGTTGATGGAACTTCGGTATGGCATTTCATCAATTCGTGGGCTGAAATCTCACGTGGTGATTGTTGCAATCAAATATCTAAACTCTCAACACAACGTTGGTTTCCAGATGGTATTCAACGTCCCATACGATTTCCCTTCATTAAGCTGTTACAAAAGAACAAATCTGATGGGTTGAGTTTTTCATCATCTAATAACGAAAAACTCAACCCATCAGAGAGGTTATTTCATTTCACAAAGGAGAAAATCTCTCAATTGAAATTGAAAGCCAACGTAGAAATGGGCACCAACAAAATATCTTCCCTTCAAGCAGTTTATGCACACCTTTGGTGCTCCGTGATCCGTTCCGACCAATTAGACCCGCAAGAAAACACATATTTTAGGATCTCGATAGGAGCTAGACAAAGGTTTGTTCCACCGTTGCCGAAAGATTATTTTGGAAATGCTGTTGTAGGTTCTATGGTTGCAATGAAAGTTGCGGAGTTGTTGGAAGAAGGCGGACTTGGTAAATGTGCTTGGAAGATGCACCAAATGATTTCTTTGCACTCAAATGAGAAGTTGAAGAATGACTATGAGAATTGGGTGAGAAATCCAATCATCCATAGACTTGGTAATAGTAACATTGCCGTTTATCGTGTGTTGGCTATTAGCAGTTCCCCGCGGTTTGATGTTTATGGCAATGATTTTGGATGGGGAAAACCTGTGGCGGTTCGTAGTGTTAATAATATAAGTGGACTGGTTGTTGTATTTGCTGGAATAGAAGAAGGTAGTATGGACCTTCAAGTATGTCTTCCTCACAAGATTTTGGAGGCAATGGGTAATGATCCTCTTTTCATGGACTTTGTATCCAATTAA 1332 0.4047 MAAIRVLSTDTIKAPNSTDEKIDLTPWDLKNLLVEHTQKGLLYHHPIESNQIRHLKHSLSSALAFFPPLAGRLEIIDHKDNTMSCSVICNNAGVLFVHAATENTSVGDILGCTYIPPILNSFYPLNGIKNYEGTSQPLLAVQVTELVDGIFIGFTFNHQVVDGTSVWHFINSWAEISRGDCCNQISKLSTQRWFPDGIQRPIRFPFIKLLQKNKSDGLSFSSSNNEKLNPSERLFHFTKEKISQLKLKANVEMGTNKISSLQAVYAHLWCSVIRSDQLDPQENTYFRISIGARQRFVPPLPKDYFGNAVVGSMVAMKVAELLEEGGLGKCAWKMHQMISLHSNEKLKNDYENWVRNPIIHRLGNSNIAVYRVLAISSSPRFDVYGNDFGWGKPVAVRSVNNISGLVVVFAGIEEGSMDLQVCLPHKILEAMGNDPLFMDFVSN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02900 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 438 - -
Mepo5g02900 443 Gene3D - 2 200 IPR023213 -
Mepo5g02900 443 Pfam Transferase family 5 434 - -
Mepo5g02900 443 Gene3D - 211 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02900 Mepo-Chr5 35295330 35296661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02900 55 394 Monolignol Biosynthesis Gene Families AT5G48930 29.598 6.65e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02900 - - gmx:100500257 494.582