LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g02895	ATGTGGAAATTTAAGCCATTCGCACATAAAGAGCAAAATGGTCTTGAAGGTCGTTCTATAGACGTTGGTAATCTCAAACTACATGTCCACAAGCTCATTGCTGAAGGAGGGTTCTCATGCGTCTACTTGGCTCGTGATGCTGTACATATGTCGAAACAGTATGCTTTGAAGCACATAATATGCAACGATGAAGAATCACTTGGATTAGTGAAGAAGGAAATATCCGTGATGAAGTTGTTGATAGGACATCCCAATGTTGTCACACTTCATGCTAATGCCATCTATGATATGGGTAGGACAAAAGAGGCATTCCTTGTAATGGAATTTTGTGAGAAGTCTCTGGTTAGTGTGCTGGAGAGCCGCGGTGCTGGTTATTTTGAAGAGAGGCAGGTTCTTTTAATCTTCAGAGATGTGTGTAATGCAGTCTTCGCCATGCACTGCCAGTCTCCACCTATTGCTCACCGAGACTTGAAAGCAGAAAATCTTCTGTTGGGTTCAGATGGTTTATGGAAGTTGTGTGATTTTGGAAGCATTTCCACAAATCACAAACGTTTCGAGAAGCCAGAAGAAATGGGAATTGAGGAAGATAATATCAGAAAGTACACAACCCCTGCCTACAGACCACCCGAGATGTGGGATCTGTTCCTGAGAGAAGTCATTAATGAGAAAGTGGACATATGGGCACTTGGGTGTCTTCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATCAACCTAAATTCAATTCAACCTTCACGGACTTGATCAAAGACATGCTTCAAGCTCGACCAGACGACAGACCAGATATCACGCAGGTTTGGTTTCGTGTTAATGAGCAGCTACCCATTGATTTACAAAAGTCATTGCCTGACAGGCCACCTGAATCACCCGCTTCCAACAATCACGAAGGTGCTTCAATGTCCACAAACAAATCAAGTGCAATGCCTCGCAGAAATCCACCTCCTCCTCCATCGGTTGCAGAACCCAAAACTACCCCTCAGCCATCTCTTGCTTCTAGGGGAGGGGAAAGTGGGGGGCAGCTTGGTGCCTTCTGGTCTACTCTGCATGCAAAGGATTCACGTGTCCCTGAGGAAAAGGGCAAACCTGTATATGATGAAGAACGATCTAGCCACCACAAAGTTCGTCCGGACAATGATCAGTTACCGAAAAATGTTAGTACTAAAAAAGTGACTAACACACAAACTCAGACTGTAAAAAGCAGTATACATGGAAAGTTGCACAAACCTGAAGCTGTATCTTCCAAGGACTTTGAAATAAATTTTTTCCCGGATAAAGGTCATGCAAATGAGAAGCAAATGTCAAATCTGGAGAAGAAAAATAATAATTTTCAAGACCAGTCTTTTAACACTTTTGTTGCAGAGTTCGATACCGCTAAGCTAAGCTCCGGGCATGGTAGCAAATCCACAAGGGAAGAAGCATTAGAGTCTGAGGTGGAGAAACTCAGAGAGCAGCTGAAGGAAGCTAACTTAGAGAAATCTGAAATCACTGCCAAGTATGAAAAGCTTACTGCTATTTGCCGTTCACAAAGGCAAGAATTGCAGGATCTCAAGCAAACACTTGCAGCAAAAACTCCATCTCCAAGTAGAGAGGGTTTCAGAACCTCTCCTGCAGTTGCATCATCTGCATCTTTGCAGGATAGAAGTGAATGGAAAACTCCTAGTTCAGAACCAAAGTCATCATGGCAACCTTTCCCAGAGGAAACTGAACCGTTTAAGTCCCTTTCAGCAGACAATGCTTCAAAATCTGTTAGGTCAAGAAATGGTCAGCAGAACAAGCCGGCTACTCAACCAGCTGCTGATTTTGATTCTTGGGGTTTTGGCGCAGATACATTTAGTGCTGCTCGTGCTGGTAGTGGTAGTCCACAGATGCCAAGACCTGGTGAAGGGAGTAAAGCTCATGTTTTCGGTGAGGCCAAGGGTTTTGAGAGCAAATCAACTTCTCAACCTGCTGGATGGGCTGGTTTTTAG	2037	0.4374	MWKFKPFAHKEQNGLEGRSIDVGNLKLHVHKLIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVMKLLIGHPNVVTLHANAIYDMGRTKEAFLVMEFCEKSLVSVLESRGAGYFEERQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGLWKLCDFGSISTNHKRFEKPEEMGIEEDNIRKYTTPAYRPPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDQPKFNSTFTDLIKDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPDRPPESPASNNHEGASMSTNKSSAMPRRNPPPPPSVAEPKTTPQPSLASRGGESGGQLGAFWSTLHAKDSRVPEEKGKPVYDEERSSHHKVRPDNDQLPKNVSTKKVTNTQTQTVKSSIHGKLHKPEAVSSKDFEINFFPDKGHANEKQMSNLEKKNNNFQDQSFNTFVAEFDTAKLSSGHGSKSTREEALESEVEKLREQLKEANLEKSEITAKYEKLTAICRSQRQELQDLKQTLAAKTPSPSREGFRTSPAVASSASLQDRSEWKTPSSEPKSSWQPFPEETEPFKSLSADNASKSVRSRNGQQNKPATQPAADFDSWGFGADTFSAARAGSGSPQMPRPGEGSKAHVFGEAKGFESKSTSQPAGWAGF	678

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	374	402	-	-
	Mepo5g02895	678	FunFam	probable serine/threonine-protein kinase DDB_G0280111	10	305	-	-
	Mepo5g02895	678	Gene3D	Transferase(Phosphotransferase) domain 1	10	305	-	-
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	332	346	-	-
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	309	331	-	-
	Mepo5g02895	678	Pfam	Protein kinase domain	28	289	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	664	678	-	-
	Mepo5g02895	678	PANTHER	SERINE/THREONINE PROTEIN KINASE	1	655	-	-
	Mepo5g02895	678	Coils	Coil	494	542	-	-
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	539	678	-	-
	Mepo5g02895	678	CDD	STKc_GAK_like	29	298	-	-
	Mepo5g02895	678	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	596	620	-	-
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	539	585	-	-
	Mepo5g02895	678	SUPERFAMILY	Protein kinase-like (PK-like)	27	339	IPR011009	-
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	301	433	-	-
	Mepo5g02895	678	SMART	serkin_6	27	291	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g02895	678	ProSiteProfiles	Protein kinase domain profile.	27	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g02895	678	MobiDBLite	consensus disorder prediction	403	425	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g02895	Mepo-Chr5	35188240	35193116	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g02895	26	352	CBL-interacting serine-threonine protein kinases	AT5G58380	28.977	8.69e-20	91.3

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Mepo5g02895		Pkinase	1.8e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g02895	K08853		-	gmx:100808507	1006.9