LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g02888	ATGGCTGCGAAGTTACTGCATTCTTTAGCAGATGACAATCAAGATCTGCAGAAGCAGATTGGTTGTATGACTGGAATTTTTCAGCTCTTTGATCGTAATCAGATGCTCACGGCTCGTCGGATTAGTCAAAAGAGGCTTCCTTCTGGTAATTTGCACTTCAGTGATGGCAGCTTGGAAAGAGATTCTGATAGTATGCAGCATCAAGCAATGGAAACCGATTCAAGTTTAAACAGAGGACTGAATGAAAAGCAAAGACTTTCGACGGAGTCATCAAGAGCATCATTCTCTTCATGTTCATCATCAGTGTCTTCTCTTGATTTTAAGGCTGAAGTTGAGACTTCCTATGAAACCCCTTCAAGGGACACATTTATGAACCAGCCAACTATCTCTCCCCGTTTCGGACGTCACTCCCTCGACCTGCGTGATGTGGTGAAGGATTCTATGTATAGGGACCCTCGAGGGCCGTCTGGAAAATCTACGGCCAAAGAGCAATCTACCATTCATGCCATGAAGCACAGGGATTCACCGCGACCTCTTCAGATGTCGAAATATGTTGATAGATCTTATGGAGTTGAAATAGATGAAAAGCAAAGTGTGCCCATTGATCTAAAGGAGTCTATCCGAGTTCTTTCTAAACTTAGAGACGCACCTTGGCATTATGCAGAAACTGCTAGAGAAAATCCAAGATCTTCACAAGAAGTAAAAGATGGACACTGGCATTCCATCTCAAAGGATGCTCCTTGGTTAGCTTACGATGGAAGAGAAACGAGTCGTTTATCTTTTGAATCGCGAGAGACGATCAGATCAGCACCAAAGCTAAAAGAGTTTCCTAGGCATTCACTGGATAGTAAGGAAGGTTCATGGCGCACTTATAGCTCCGAGGCCAAACCCAACCACCTATCAAGAAACTCTTACGGTGCCACCTCCATCTCGAATGAAAAATTCTCTAGCCCACAACAGTCTTCTTCATCAAGCCAGAGTCGGCCACCGAGTGTTGTAGCAAAACTAATGGGCTTGGAAGCAATACCTGATTCCTCATTTGCCGGTGATACTCAACCAGGTTCAACTGAACCTTTCTCAGCTCAAGATAACAGTCAGTTTCCAAAAGCATCGAAAAATGGATTCATACGACCGCTTCGAGTTTCTAATTCTCCAAAAATCTCCTTGAAAGATCCAACTTCCCCAAGGCGGAAGAATTCTGAGGTGGTTATGAAACCGGTCTCTAGTTCAAAGTTTCCGCTTGAACCAGCACCATGGAAGCAGCAGTATGATGCAAATAGAAACTCTCAGAAACAAAGTTTAAGAACAACAAAAGCTCCATTGAGAACACTGGATTCATCTCCTTCGGTTTATAGTGAGATAGAGAAGCGGTTGAAGGACCTTGAATTCAAACAATCTGGAAGGGATCTTAGAGCACTAAAGCAGATACTAGAAGCAATGCAAGAAAAGGGTCTGTTAGAGAGCAGAAAAGATGAACAAGTTCCGAACGGAGTTGGAGGTCGAAGTGACTATGAACCTAAAGCTACGAATCTAAATCAGAATTTGAGGTCGGTGAAGCAACAAAATCCTCAAAGAAACAATTTTCTATCTTCTACAATCAAGGGAAATGATTCAGCAAGAGCTTTTGATTCACCGATAGTGATAATGAAACCAGCAAAACTGGTTGAGAAATCTGAGATTTCCGCTTCTTCAGCTATTCCAATGGGTGGCTTTTCTGGTTCCAATAATAGAAACAACATATCTTATACTCCAATAGCAAAAGAGCAATCTTCAAAGAATATTCGGAGGGACGGTTCTCCGGTTTCCATTGATAAGAAAACAAGTATTACCAAGCCTACAAGATCCCCACAATCTCAATCAAGGTCTCAACAATTTCCAAGAGAAAATAACCAAAGTTCAGTGAAGAATTCAGGATCAGTGAGTCCAAGATTACAACAGAAAAAGTTGGAGTTAGAGAAGCGATCTCGTGTGTCTACACCACCACCATCAGATTCAAACAAATTCAGAAGGCAATCCGGTAAAAAGGCAGCATCAGAATCAGTTTCCCCGGGTAGAAAAGTACACCACAAAATCCTCAACTCGCAGCATAGTGAAGAGCAACTGAGTGAGATAAGCAACGAGTCTAGAAATTTCTGCCAAGGCGATGAAATTTCTCTTCAATCCGACAGCGTCACTTTCGACTCTAAATTGGATATTGAAGTCACTAGTAGTTTACGTTCTTCTGAAATTGATGACAGCCAAAGTCCATCCTTGAAGGCTATAAAGCAATTGATTTCAGAAACAGTTCAGAAAAAATCAACTCCAAGGTTGGATGAGGATGAGACAATTTCAGAATTTACAACTAAGGCCCCGGAACATCCTAGTCCTACATCTGTTCTCGATGGATCGGTGTACAAAGATGACGAGCCATCGCCAAAAACGCAGACACCTAAAGATCCGAAAGTTGGAAATGCTCAGGAATCCAGAGACAATGAGGTTAAAGATCAATGGAAGCCTGATGGTGACCTTTCATTTAACGGCACAGGATCTGGAGAGATTAATCGCAAGAAATTACAAAGCATAGACCACCTTGTTCAGAAGCTTAGACGTTTGAACTCAAGCCATGACGAAGCTCGAAACGATTACATTGCTTCCCTATGTGAAAACTCAAATCCAGACCACAGATACGTATCTGAAATACTACTAGCCTCTGGTCTCTTACTTAGAGATCTGAGTTCTGAATTTCTGACATTTCAACTACATTCATCTGGTCATCCTATTAATCCGGAGTTATTCCTGGTCTTGGAGCAGACCAAGGCAAGTAGTTTGCTTTCGAAAGAAGAAAGCAGCTTCGGAAAAGCTGCTTTCTTGAAGCAAAATGCGGAGAAATTTCACCGAAAACTAATTTTTGATGCTGTGAATGAAATTCTTGTTACAAAACTTGGTTATTCTCCCGAGCCATGGTTTCAGCCTAACAAGCTCACAAAGAAAAACCTCAGTGCTCAAAAGCTTCTTAAAGAATTATGCTTCGAGATAGAGAAAGTTCAGGCTAAGAAAACTGAATCCTGCTTAGAAGATGATGAAGAGGACGATGGTTTGAAGAGTTTGTTGTGTGAAGATGTCAAACATGGAACAGAAAGTTGGGAAAATTTCAATGGTGAAATACCTGGAATTGTGTTGGATGTTGAGAGACTTATATTTAAGGATTTGGTAAATGATATTGTGATTGGTGAAGCAGCTGGCTTGCGAGTCAAGTCATCGGTTCGGCGCAGGAAACTATTCGGAAAGTAG	3270	0.4165	MAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRNQMLTARRISQKRLPSGNLHFSDGSLERDSDSMQHQAMETDSSLNRGLNEKQRLSTESSRASFSSCSSSVSSLDFKAEVETSYETPSRDTFMNQPTISPRFGRHSLDLRDVVKDSMYRDPRGPSGKSTAKEQSTIHAMKHRDSPRPLQMSKYVDRSYGVEIDEKQSVPIDLKESIRVLSKLRDAPWHYAETARENPRSSQEVKDGHWHSISKDAPWLAYDGRETSRLSFESRETIRSAPKLKEFPRHSLDSKEGSWRTYSSEAKPNHLSRNSYGATSISNEKFSSPQQSSSSSQSRPPSVVAKLMGLEAIPDSSFAGDTQPGSTEPFSAQDNSQFPKASKNGFIRPLRVSNSPKISLKDPTSPRRKNSEVVMKPVSSSKFPLEPAPWKQQYDANRNSQKQSLRTTKAPLRTLDSSPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKDEQVPNGVGGRSDYEPKATNLNQNLRSVKQQNPQRNNFLSSTIKGNDSARAFDSPIVIMKPAKLVEKSEISASSAIPMGGFSGSNNRNNISYTPIAKEQSSKNIRRDGSPVSIDKKTSITKPTRSPQSQSRSQQFPRENNQSSVKNSGSVSPRLQQKKLELEKRSRVSTPPPSDSNKFRRQSGKKAASESVSPGRKVHHKILNSQHSEEQLSEISNESRNFCQGDEISLQSDSVTFDSKLDIEVTSSLRSSEIDDSQSPSLKAIKQLISETVQKKSTPRLDEDETISEFTTKAPEHPSPTSVLDGSVYKDDEPSPKTQTPKDPKVGNAQESRDNEVKDQWKPDGDLSFNGTGSGEINRKKLQSIDHLVQKLRRLNSSHDEARNDYIASLCENSNPDHRYVSEILLASGLLLRDLSSEFLTFQLHSSGHPINPELFLVLEQTKASSLLSKEESSFGKAAFLKQNAEKFHRKLIFDAVNEILVTKLGYSPEPWFQPNKLTKKNLSAQKLLKELCFEIEKVQAKKTESCLEDDEEDDGLKSLLCEDVKHGTESWENFNGEIPGIVLDVERLIFKDLVNDIVIGEAAGLRVKSSVRRRKLFGK	1089

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	275	331	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	422	440	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	565	589	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	147	176	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	68	93	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	565	708	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	603	644	-	-
	Mepo5g02888	1089	PANTHER	LONGIFOLIA PROTEIN	1	1087	IPR033334	GO:0051513
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	765	780	-	-
	Mepo5g02888	1089	Pfam	DUF761-associated sequence motif	321	347	IPR032795	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	47	93	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	681	696	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	348	371	-	-
	Mepo5g02888	1089	Pfam	Domain of unknown function (DUF4378)	886	1066	IPR025486	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	816	832	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	763	845	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	286	331	-	-
	Mepo5g02888	1089	Coils	Coil	854	874	-	-
	Mepo5g02888	1089	MobiDBLite	consensus disorder prediction	344	440	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g02888	Mepo-Chr5	35118335	35124078	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g02888	133	1088	TRM (TON1 Recruiting Motif) Superfamily	AT1G74160	44.890	0.0	609

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g02888	-		-	gmx:100787391	1516.52