Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02886 ATGATGGCAAGTTCAAGAGAAGGAAATTATCAAGCAAAGCAAGAAGGAGATGATACTAGTATGGATAATATTGAAAAAATTTCCAAGGCACCTTCAAGTGCTTCAAGACAATGGTCAACATCAAGTTTAAGAAATCCAAGAATTGTGAGAGTATCAAGAACATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATAAGAGGGTTAAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAATTATATGATCTTCAAGATAAACTTGGTTTAGGACAACCAAGTAAAGTAATTGATTGGTTACTTGAAGCAACAAAATTAGACATTGATAAACTCCCTCCACTTCAATTTCCTCAAAGCTTTTCACAATTTCATCCTTTTCATCCACAAACCCTACTTCCTTTTCATGATCAATCAAGTAATATTGCTTCTCATGAACTTTCTCTTGGTCCTTTATATGATCCTAATCCCACATTTGTTGGAATTCAAAATCTTATGGCAAGGTCAAAATTTTGGGACATAGATTCAAGAACTAAAGGTAAAGAAGTTGAAAGAGAGTACTTTAGTGAAAAGGATAAGTGGATCAAAACAAATGAGGAAGAAAATCAAGTTGGAGAAGCTAGTTACAATAATTTTCATCAAGTTTCAACTCAAAAGCTTTTCCCTATGGAGACTCATTCTAATTTTCTAAACAATGCTATGTCATATAACAACTACCATTCAGAAGCTTCTAGTTTGTCTTTATCTCAATTTGGAAATAGTAATGGATTGTTCCAATCTCATCAACAAGTAGATCCAAATCAAAGTAATGGAAATGGTTTACACTTCCCATTTCCTTTTGCAAATTCACAATTATTGTTTGGTCCTTCTTCTTCTTCTACTACACCATCATCATCACATTTGAGTAATCCTTTTATGAACAATCCAGTTGAAAATGATCCAAGAATACAATTCAACCATTTTCAGTTCATAAACTCAAGTTCTTCACAAACTATGCCTCAGCCTCTCATTCCATCTTTTCATCACTCATTCAATTCACCTCCGGTTAGACCTTTTCCGGTACCATTTAGCTCCAAGCTTTTGGATTCTAATAACAATAACAGTAGTAACCAACCGGATGATAATAGTGGTCGTCATTCTTGA 1152 0.3411 MMASSREGNYQAKQEGDDTSMDNIEKISKAPSSASRQWSTSSLRNPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLGQPSKVIDWLLEATKLDIDKLPPLQFPQSFSQFHPFHPQTLLPFHDQSSNIASHELSLGPLYDPNPTFVGIQNLMARSKFWDIDSRTKGKEVEREYFSEKDKWIKTNEEENQVGEASYNNFHQVSTQKLFPMETHSNFLNNAMSYNNYHSEASSLSLSQFGNSNGLFQSHQQVDPNQSNGNGLHFPFPFANSQLLFGPSSSSTTPSSSHLSNPFMNNPVENDPRIQFNHFQFINSSSSQTMPQPLIPSFHHSFNSPPVRPFPVPFSSKLLDSNNNNSSNQPDDNSGRHS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02886 383 MobiDBLite consensus disorder prediction 356 383 - -
Mepo5g02886 383 MobiDBLite consensus disorder prediction 25 41 - -
Mepo5g02886 383 MobiDBLite consensus disorder prediction 1 17 - -
Mepo5g02886 383 MobiDBLite consensus disorder prediction 290 315 - -
Mepo5g02886 383 MobiDBLite consensus disorder prediction 361 377 - -
Mepo5g02886 383 ProSiteProfiles TCP domain profile. 57 115 IPR017887 -
Mepo5g02886 383 Pfam TCP family transcription factor 57 182 IPR017887 -
Mepo5g02886 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 310 IPR005333 GO:0003700
Mepo5g02886 383 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02886 Mepo-Chr5 35085674 35087952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02886 7 376 TCP Transcription Factor Family AT5G60970 39.494 9.71e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo5g02886 TCP 5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02886 - - cam:101498052 512.301