Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02882 ATGGCCAATCAACACCGGTTAGTTAACGTTGCTGATAATCGTACTTCTTCTGTTTCCTCTTCTCCACCAAGAAGACTTAATGGATTAACTCTCAACATGATTCCTACTTCTGACAATGGTGGATGGACACATCTGTCATCCATCCGAGAGAGAGATAACAACCCATTCTCCTCCTCATATCCAACTATTGGAGGACAAACTGGAGTTGGACCTGTTTCACCTGCTGCAGGTAACAATATTAGTGATGTCATGTCAACGTTGCCTTTTGGTAGTGGAGTTAACACCACCACCACCACCACCACCAATGTTGCTGCTACTACTGGTAGAATATGGTGGAACCAACGTGGTGGTGGAGTTAACACCACCACCACGGCTGCTACTACTGTTCCTAGGAGGCATGGAAGTTTTGTTACACCGCCTTCAAGTCCATTACTGAGTGAGCAATACATGCAAACTGATTCAACATTGGCAAGTTCAGAGAATCCAGCTCGTCCTGGCGGTAATAACAACATTTTCATTTCTGCTTCTGAAATTAGGACTGAAACGGATAGGCTCATGGATGAGATTCAAAGCACCCTAGAACATCTTCGCAACGGTGGCTCTATCCGGAGTGAGGATATGATGATACTTGATTTTCTGGTCACAATAAATCCGCTAATTGATTCAGATGATTGGTCGAACCAGATAATGATGGCCCTTGAGGGTCACATTGGTATGGTTGAGAGGGGTCTGACAGAGGAGGAAATTCTTAGGCGCATCTATGAAGAGACTTACCAGTTTAACCCTGATGAAACCAGCACTCAAAACCAAACATGCACCATATGCCAGGAAGACTTTGTGGATGGGGAGAGTATTGGTAGACTTAACTGCATACATGTTTATCATCTTCAATGCATCAAACAATGGTTGGAGCTGAGGAATACTTGTCCTATTTGTAAGAGAAGAGGTCTAGAAATTAATGAAGATGAGGATGGAAATTGA 981 0.4353 MANQHRLVNVADNRTSSVSSSPPRRLNGLTLNMIPTSDNGGWTHLSSIRERDNNPFSSSYPTIGGQTGVGPVSPAAGNNISDVMSTLPFGSGVNTTTTTTTNVAATTGRIWWNQRGGGVNTTTTAATTVPRRHGSFVTPPSSPLLSEQYMQTDSTLASSENPARPGGNNNIFISASEIRTETDRLMDEIQSTLEHLRNGGSIRSEDMMILDFLVTINPLIDSDDWSNQIMMALEGHIGMVERGLTEEEILRRIYEETYQFNPDETSTQNQTCTICQEDFVDGESIGRLNCIHVYHLQCIKQWLELRNTCPICKRRGLEINEDEDGN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02882 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 41 315 IPR045191 GO:0061630
Mepo5g02882 326 CDD RING-H2_RNF24-like 270 315 - -
Mepo5g02882 326 ProSiteProfiles Zinc finger RING-type profile. 272 313 IPR001841 -
Mepo5g02882 326 SUPERFAMILY RING/U-box 262 315 - -
Mepo5g02882 326 SMART ring_2 272 312 IPR001841 -
Mepo5g02882 326 MobiDBLite consensus disorder prediction 1 32 - -
Mepo5g02882 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 316 IPR013083 -
Mepo5g02882 326 Pfam Ring finger domain 271 313 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02882 Mepo-Chr5 35032277 35035246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02882 183 318 C3H Transcription Factor Family AT2G15530 33.557 1.19e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02882 - - mtr:11405780 224.172