Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02834 ATGTACCCTCAACAACAATACCAAGCTCAACCTTACAATTTCCAGCAACAACAACAACACCCATACTATTCATCATTTCCTGATCCTTCACTTCATCCTCCTGGCACTGATCCACTTGCAAATTCAACATCTTTTGCACCTCCTGTTTCTCTTTACACCTCCCAACCAACAGATTATCACAATTGGATCGTTCCACAATCTGAACCTATCAGATATGATCTTGCTGTTGGTTCATCACACGAGACTTCAGCAGCACCTGCAAGTTTACCTTCTGCGTGGAATGGTACATGGCCACCACAAATTTATGGCAATGAGACTACGACAATGTTGCCTAACCAAACCAAAGTTACCAAAGCTTTGAGATGTGAAGTGTGTAAACTTGATGTCAATAGCAAAGACTCTTATGATAGTCACATAGCTGGAAAGAAACACAAGAAGAATTTGCAGGTACAGACTAATCCTACTATTGCATCTCATGCGAATGTACAAACTGACACAAGTAGTATCCAAGGAGAAGCGTTAATTGGTCCTGTAGTCAAGCAATCCGAGCCTAAGAAACAGGTTGATTCTGCAACGGTTTGCTCAACTTGCAATGTTTTGTGCACTAGTCAAGATGCATATATCAAACATGTTGGTGGGAGAAAGCACGCTGCTCAGGTTGCCTTGATGTCTAATAATGGCATTGGCCCATCTATTGCCGAATTCAAGCGTAACGGTGTTGGTCCATTTCAAAAAGCTGCCAAGAAAATCAAGGTTGCTCAATCTGCATGGTGTGAAGTTTGCAAGATTAATTGTAACAGCAGGGATATCTACATTACACACTTAGCAGGTAAGAAACACTTGAAGAACTTGGAGAAACTGTCAAATCCAAAAATTGATGTCGGCACTAGTGGCACTTCCACCGCCACTGCAACAAATACTTTAATCGGGCCACAAGAAAAGCCAGGTACCGATCAACCAAAACCAAAGAAGGCATCAGAACTTGATATCGAGACAAAGAAACGTAAAGTTGTAGAAGGAGGAGCTGCAGTTGATGGTATTAAAATGTGCACTTTATGCAATGTGGTGTGTAATAGCCAGACAGTTTTCAATTTTCACCTTGTTGGCCAGAAACATGCTGCTATGGTAAAGAAGGCAGGGTCAATCACTGGTTGA 1155 0.4173 MYPQQQYQAQPYNFQQQQQHPYYSSFPDPSLHPPGTDPLANSTSFAPPVSLYTSQPTDYHNWIVPQSEPIRYDLAVGSSHETSAAPASLPSAWNGTWPPQIYGNETTTMLPNQTKVTKALRCEVCKLDVNSKDSYDSHIAGKKHKKNLQVQTNPTIASHANVQTDTSSIQGEALIGPVVKQSEPKKQVDSATVCSTCNVLCTSQDAYIKHVGGRKHAAQVALMSNNGIGPSIAEFKRNGVGPFQKAAKKIKVAQSAWCEVCKINCNSRDIYITHLAGKKHLKNLEKLSNPKIDVGTSGTSTATATNTLIGPQEKPGTDQPKPKKASELDIETKKRKVVEGGAAVDGIKMCTLCNVVCNSQTVFNFHLVGQKHAAMVKKAGSITG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02834 384 SUPERFAMILY beta-beta-alpha zinc fingers 96 150 IPR036236 -
Mepo5g02834 384 Pfam Zinc-finger of C2H2 type 121 144 - -
Mepo5g02834 384 Pfam Zinc-finger of C2H2 type 350 372 - -
Mepo5g02834 384 Pfam Zinc-finger of C2H2 type 194 216 - -
Mepo5g02834 384 Pfam Zinc-finger of C2H2 type 257 280 - -
Mepo5g02834 384 SUPERFAMILY beta-beta-alpha zinc fingers 254 287 IPR036236 -
Mepo5g02834 384 Gene3D Classic Zinc Finger 104 151 - -
Mepo5g02834 384 Gene3D Classic Zinc Finger 327 379 - -
Mepo5g02834 384 Gene3D Classic Zinc Finger 243 287 - -
Mepo5g02834 384 SMART ZnF_U1_5 189 223 IPR003604 GO:0003676|GO:0008270
Mepo5g02834 384 SMART ZnF_U1_5 345 379 IPR003604 GO:0003676|GO:0008270
Mepo5g02834 384 SMART ZnF_U1_5 253 287 IPR003604 GO:0003676|GO:0008270
Mepo5g02834 384 SMART ZnF_U1_5 117 151 IPR003604 GO:0003676|GO:0008270
Mepo5g02834 384 MobiDBLite consensus disorder prediction 18 44 - -
Mepo5g02834 384 Gene3D Classic Zinc Finger 178 228 - -
Mepo5g02834 384 MobiDBLite consensus disorder prediction 295 313 - -
Mepo5g02834 384 PANTHER ZINC FINGER RNA-BINDING PROTEIN 20 163 - -
Mepo5g02834 384 MobiDBLite consensus disorder prediction 295 328 - -
Mepo5g02834 384 SUPERFAMILY beta-beta-alpha zinc fingers 184 222 IPR036236 -
Mepo5g02834 384 SMART c2h2final6 348 372 IPR013087 -
Mepo5g02834 384 SMART c2h2final6 192 216 IPR013087 -
Mepo5g02834 384 SMART c2h2final6 256 280 IPR013087 -
Mepo5g02834 384 SMART c2h2final6 120 144 IPR013087 -
Mepo5g02834 384 SUPERFAMILY beta-beta-alpha zinc fingers 343 378 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02834 Mepo-Chr5 34354987 34360531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02834 189 382 C2H2 Transcription Factor Family AT5G61190 29.897 5.30e-22 96.3