Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02800 ATGTCAATCTTACTTATGCAACTCAGCTGTTATGCACTAGGTTCGCCATATCACTGGCTGAGGGAATTGAGATACGACTCTCAGAGCTTAAATCCAATGATCCCTCTTATTGAGTGTGCAAAATGTGTTGCATCTGGAAGCATAAAAAATGCTGATATTGGACTTGAGTATATTTCTCAGATTTCATCACCTCATGGTAATGGTGTACAAAGAATGGTCACTTATTTCAGTGAAGCACTTGGATACAAGATAGTTAAACATTTACCTGGTGTTTACAAAGCTCTCAATTCCTCGAAAATATCATCGTCTTCAGACGATATCCTTGTTCAAAAATACTTCTATGATCTGTGTCCTTTTTTGAAGTTTTCATACCTGATCACAAATCAAGCAATTATTGAATCGATGGAATGTGAAAAGGTCGTTCATATTATTGATCTCCATTGTTCTGAACCAGATCAATGGATAAATCTTATACAAACTTTAAAGAAACGTCCGGGAGGTCCGCCCCATCTGAAAATTACAGGAATTCATGAAAGGAGAGAGGTATTGGAACAAATGAGCTTTCATTTGACAACCGAAGCAGGGATTTTGGATTTTCCTTTACAGTTCAATCCAATAATTAGCAAACTTGAAGATGTCGATTTTGAAAACTTGCCTGTCAAGACAGGAGACGCTGTTGCAATTTCTTCTGTTCTTCAGCTGCATTCTCTCCTTGCCACTGATGACGAAATGGTCTCCTCAGCAGGTGCGGCATCTTTCAATATGCAGAGAGCAGCGCACATGGGTCAGAGGACTTTCGCAGAGTGGCTAGAGAGAGACATGATCAATGCATATATCTTGAGTCCCGATTCAGCATTATCACCTCTTTTTTTAGGTGCTTCACCTAAGATGGGGATCTTTCTTAACGCTATGCGAAAACTACAACCGAAACTTTTAGTGATTACTGAACAGGAATCAAATCTGAATGGATGTAATTTAACGGAGAGAATCGATCGAGCATTGTACTTTTATGGTTCACTTTTTGACTGCTTGGAATCTACTGTTACGAGAACATCAGTCGAGAGACAAAAACTCGAGAGCATGCTTCTTGGAGAGCAAATAAAGAATATTATTACTTGTGAGGGAGTCGATAGAAAGGAAAGGCATGAGAAGCTCGAGAAATGGATACGAAGGCTTGAAATGACTGGATTTGTGAAGGTACCTTTGAGTTACAATGGGAGGATAGAAGCAACTGATCTATTGCAGCGATATAGTCACAAGTACAAGTTTAAAGAAGAAAATGATTGTTTGCTTATCTGCTGGAGTGACAGACCACTTTTTTCTGTATCGGCCTGGAAATTTAGGTGA 1347 0.392 MSILLMQLSCYALGSPYHWLRELRYDSQSLNPMIPLIECAKCVASGSIKNADIGLEYISQISSPHGNGVQRMVTYFSEALGYKIVKHLPGVYKALNSSKISSSSDDILVQKYFYDLCPFLKFSYLITNQAIIESMECEKVVHIIDLHCSEPDQWINLIQTLKKRPGGPPHLKITGIHERREVLEQMSFHLTTEAGILDFPLQFNPIISKLEDVDFENLPVKTGDAVAISSVLQLHSLLATDDEMVSSAGAASFNMQRAAHMGQRTFAEWLERDMINAYILSPDSALSPLFLGASPKMGIFLNAMRKLQPKLLVITEQESNLNGCNLTERIDRALYFYGSLFDCLESTVTRTSVERQKLESMLLGEQIKNIITCEGVDRKERHEKLEKWIRRLEMTGFVKVPLSYNGRIEATDLLQRYSHKYKFKEENDCLLICWSDRPLFSVSAWKFR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02800 448 ProSiteProfiles GRAS family profile. 23 446 IPR005202 -
Mepo5g02800 448 Pfam GRAS domain family 36 446 IPR005202 -
Mepo5g02800 448 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 442 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02800 Mepo-Chr5 33892276 33893622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02800 12 448 GRAS Transcription Factor Family AT1G50420 49.107 1.12e-149 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo5g02800 GRAS 7.7e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02800 - - gmx:100779726 743.036