Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02799 ATGCACCACTCCAATTTATGCCTAAGGAATGATGAGTCAGCATACGTTGATGGAAATGGGCAGCTGGATCAGAAGGCTTCTGGAAAAAAACTTGAAATCAAACTGAATTCTATCAATGAAGAGCTGGATGTTGCAGAGACAAAGCAGTTCCAAAGCCCAAACGTGAGGAATTGGCTTGATCACTTCATACATGAGGTATACAAAGCAGAGCAACTATTGGATGTGATTGCTACTTACATACAACAGAAGATCACAACACGAAGCTTTCTTTCAGGTTTCATTAATCGACGATTTGAATCTAGGATTAAAGTATTGCTGAGGAGGCTAGAGTTCCTTGCAGATCAAAAGGATATTTTGGGACTTCAAGAGTTAACTAGTGGTGATTATGAAATTGGAGTCAAACGGAAATTGTTAAAAGAATTTAGAACTTTATCTTTTGTGGATGAATCTGTGATATATGGTAGAGAGAATGAAAAAGAGGAAATAATCAATTTTTTACTTTCAGACAGCGACAACCGGATACCAATAATCAGTATATTGGGTCTTATTGGGATAGGTAAAACAACCCTTGCGCAGCTTGTTTACAATGACCACATGATAGTGGAGCAATTTGAACTTAAAGCTTTTGTCCATGTTCCAGAATCTTTTGATCTTGTTAGTCTCACCCAATCAATTCTTAGGTCATTTGATTCGTCAGCAGTAGATAGTGAAGACTTTGAAATCCTCCAACGTCAATTGCAGCAGTTGCTAACTGGCAAGAAATTTTTGCTTGTTTTAGATGGTATCTGGGATATAGATGAGAATACATGGGAGCAGTTACTTCTTTTTAAATGTGGATCATCAGGAAGTAAGGTGATCTTGACAACACATGACAAGGAGGTAGCATCTAGCATGAGCTCCACTCGGATACTTCATTTGAAGCAATTGGAGGAGAGTAACTCTTGGAGTTTATTTGTGAGATATGCTTTTCGAGGTAGGAATGTTTTTGAATATCCAAATCTTGAAATGATAGGCAAAAGAATAGTAGAAAAGTGTGGGGGGCTGCCTTTAGCTCTAAAGAGATTGGGGACTATCTTGGGAACAAAATTCTCAGAACCTGATTGGGTTAAGATATTGGAGACTGATTGTTGGCATTTACCCGTGGGTGACAGCAACATTAATTCCATACTGAGATTGAGTTACCTTAACCTCCCTTCCAATCTGAAGCGTTGTTTTGCTTATTGTTCTATATTTCCCAAGGGCTATGAGTTTGAGAAGGATGAAGTAATCAAGCTTTGGATGGAAGAAGGTTTGTTGAATCGTAAGTATGAGGGAAAAATTCAAAATGAAGAAGAGTTAGGTAATGAATTCTTCGATCATCTAGTGACAATATTGTTTTTCCAACAATCAGTAACTATGCCATTATGGGCTGGTAAGTACTACATCATGCATGATTTTGTCAATGATTTAGCGAAATTAGTGTCAGGAGAATTTCGCTTACGAATAGAGGATGATCACGTGCAACATATCCCTGAAAGGACACGTCACATTTGGTTCTGCCTTGATTTGGAAGGTGGTGATAGAAAACTAAAGCAGATTCATAAAATTAAGGGATTATACAGTCTGATGGTAGAAGCACAGGGCTATGGTGACAAACGGATTAAGATAAGTCCCAATGTGCAGCAGAGTTTGTTTTCAAGACTAAAATATTTGCGGACGTTGTCTTTCTCTGGTTGCAATCTCTCAGAGCTAGCTGATGAGATTAGAAGTTTAAAGCTTCTGCGCTATCTAGACCTTTCTTACACTGAGATTACAAGCTTACCTAATTCCATTTGTAAGCTGTATAATTTGCAGACACTCTTATTGCAAGATTGTTTTAAGCTAACAGAGCTCCCTTCAGATTTTTACAAACTCAACAATTTACATCATCTTAATCTGGAAGGCACACATATAAAGAAGATGCCAACAAAGATAGAACGGTTAAACAATCTTGAGATGCTGACTGATTTTGTTGTGGGTGAGCAGCATGGATTTGATATTAAGCAGTTGGGGAAACTCAACCAACTTCAAGGAAGGCTTCAAATTTCTGGGTTGGAAAACATCAATGATCCTGCTCATGCTGTAGCAGCAAATTTGGAAGACAGAGAACATTTAGATGAATTAAGTATGTCATATGATGAATGGAGAGAAATGGATGGATCAGTAACGGACGTACAAGTCTCTGTCTTGGAGGCTCTTCAACCAAATAGAAACCTCATGAGGCTAACCATCAGAGACTACAGAGGCAGTAGCTTTCCAAATTGGCTTGGGGATTATAATTTACCCAATTTAGTATCTCTTGAATTGTTGGGATGTGAACTCCGTTCCCAGTTTCCACCACTTGGGCAATTCCCCTCTCTCAAGAAGCTTTCCATTTCAGGCTGTGATGGAATAGAGATCATTGGTCCAGAGTTTTACGGCTACAATTCATCAAATGTTCCATTTAGATCCCTTGAAACTTTGCGATTTGAGAACATGTATGAATGGAAGGAATGGTTATGTCTTGAAGGTTTCCCTTTGCTTCAAGAGCTTTGTATAAAACATTGTCCGAAGTTGAAAAGCGCCCTGCCTCAACACCTTTCTTCCTTGCAAAAATTGGAGATTATTGATTGCCAAGAGTTGGCGGCTTCAATTCCCAAGGCTGCTAATATCACTGAGCTAGAACTAAAAAGATGTGATGACATTTTGATAACTGAGTTGCCATCCGCCTTGAAAAGAGTCGTCCTTTGTGGAACTCAGGTCATTCAATCCTACCTAGAGCAAATTTTATTTAACTGTGTGTTTCTTGAAGAGTTGGAAGTTGAAGACTTCTTTGGTCCAAATCTAGAATGGTCCTCTTTGGACATGTGTAGCTGCAATTCTCTTCGCACTCTAACTATAATAGGTTGGTACTCTTCCTTCTTGCCTTTTGCACTGCAGTTGTTCACCGATCTTCATTCTCTCGTGTTGTATGACTGTCCATGGATGGAATCATTTTTTGGGAGGCAGTTGCCTTCCAAACTACACAGTCTCCGAATAGAAAGATGTACCAAATTGATGGCTGAGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTCTGAAACAATTCGGTGTTAGTGATGATTTTTAA 3129 0.3896 MHHSNLCLRNDESAYVDGNGQLDQKASGKKLEIKLNSINEELDVAETKQFQSPNVRNWLDHFIHEVYKAEQLLDVIATYIQQKITTRSFLSGFINRRFESRIKVLLRRLEFLADQKDILGLQELTSGDYEIGVKRKLLKEFRTLSFVDESVIYGRENEKEEIINFLLSDSDNRIPIISILGLIGIGKTTLAQLVYNDHMIVEQFELKAFVHVPESFDLVSLTQSILRSFDSSAVDSEDFEILQRQLQQLLTGKKFLLVLDGIWDIDENTWEQLLLFKCGSSGSKVILTTHDKEVASSMSSTRILHLKQLEESNSWSLFVRYAFRGRNVFEYPNLEMIGKRIVEKCGGLPLALKRLGTILGTKFSEPDWVKILETDCWHLPVGDSNINSILRLSYLNLPSNLKRCFAYCSIFPKGYEFEKDEVIKLWMEEGLLNRKYEGKIQNEEELGNEFFDHLVTILFFQQSVTMPLWAGKYYIMHDFVNDLAKLVSGEFRLRIEDDHVQHIPERTRHIWFCLDLEGGDRKLKQIHKIKGLYSLMVEAQGYGDKRIKISPNVQQSLFSRLKYLRTLSFSGCNLSELADEIRSLKLLRYLDLSYTEITSLPNSICKLYNLQTLLLQDCFKLTELPSDFYKLNNLHHLNLEGTHIKKMPTKIERLNNLEMLTDFVVGEQHGFDIKQLGKLNQLQGRLQISGLENINDPAHAVAANLEDREHLDELSMSYDEWREMDGSVTDVQVSVLEALQPNRNLMRLTIRDYRGSSFPNWLGDYNLPNLVSLELLGCELRSQFPPLGQFPSLKKLSISGCDGIEIIGPEFYGYNSSNVPFRSLETLRFENMYEWKEWLCLEGFPLLQELCIKHCPKLKSALPQHLSSLQKLEIIDCQELAASIPKAANITELELKRCDDILITELPSALKRVVLCGTQVIQSYLEQILFNCVFLEELEVEDFFGPNLEWSSLDMCSCNSLRTLTIIGWYSSFLPFALQLFTDLHSLVLYDCPWMESFFGRQLPSKLHSLRIERCTKLMAEREEWGLFQLNSLKQFGVSDDF 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02799 1042 SMART LRR_typ_2 561 583 IPR003591 -
Mepo5g02799 1042 SMART LRR_typ_2 631 654 IPR003591 -
Mepo5g02799 1042 SMART LRR_typ_2 584 607 IPR003591 -
Mepo5g02799 1042 Gene3D - 394 486 IPR036388 -
Mepo5g02799 1042 PANTHER DISEASE RESISTANCE PROTEIN RP 30 855 IPR044974 GO:0006952
Mepo5g02799 1042 Gene3D - 132 304 IPR027417 -
Mepo5g02799 1042 Gene3D - 308 393 IPR042197 -
Mepo5g02799 1042 Coils Coil 28 48 - -
Mepo5g02799 1042 SUPERFAMILY RNI-like 821 1020 - -
Mepo5g02799 1042 Coils Coil 95 115 - -
Mepo5g02799 1042 Pfam Rx N-terminal domain 28 83 IPR041118 -
Mepo5g02799 1042 Gene3D Ribonuclease Inhibitor 523 663 IPR032675 -
Mepo5g02799 1042 PRINTS Disease resistance protein signature 864 880 - -
Mepo5g02799 1042 PRINTS Disease resistance protein signature 345 359 - -
Mepo5g02799 1042 PRINTS Disease resistance protein signature 176 191 - -
Mepo5g02799 1042 PRINTS Disease resistance protein signature 249 263 - -
Mepo5g02799 1042 Pfam NB-ARC domain 155 373 IPR002182 GO:0043531
Mepo5g02799 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 408 IPR027417 -
Mepo5g02799 1042 SUPERFAMILY L domain-like 476 878 - -
Mepo5g02799 1042 Gene3D Ribonuclease Inhibitor 673 879 IPR032675 -
Mepo5g02799 1042 Gene3D Ribonuclease Inhibitor 880 1040 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02799 Mepo-Chr5 33885973 33890336 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02799 548 660 WRKY Transcription Factor Family AT4G12020 34.211 4.65e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02799 - - mtr:11411709 1357.81