Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02780 ATGGACACTGATAAGGAAATGTCAGCTAGTGTCGTTGACAGTAATGATGCAGTCACTGGTCACATAATCTCAACTACCATTGGAGGCAAAAACGGTGAACCTAAACGGGTGCGGACAATCAGTTACATGGCCGAACGTGTTGTTGGCACGGGATCATTCGGAATTGTTTTCCAGATCTTCAGGGGACTAGCATATATCCATACTGTGCCAGGAGTTTGTCATAGGGACGTGAAGCCCCAAATCTTTTGGTTGATCCTCTCACTCACCAAGTTAAGCTTTGCGATTTTGGGAGTGCGAAAGTTCTGGTTCAAGGGTGAAGCGAACATTTCATACATATGTTCACGGTACTATCGGGCCCCAGAACTAATATTTGGTGCGACAGAATACACTACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCAGAACTTCTTCTAGGCCAGCCATTGTTCCCAGGAGAGAATCAGTGGACCAACTTGTGGAAAATTATTAAGGTTCTGGGTACTCCAACTCGAGAAGAAATTCGTTGTATGAACCCTAATTATACCGATTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCCCCTGAAGCTATTGGACCTTGCATCGAGGCTTCTTCAATATTCACCAAGTCTTCGTTGCAGTGCTGTAACTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGAGAGCCCAATGCCCCGGCTTCCTAATGGTCGTCCTCTGCCTCCACTTTTCAACTTTAAACAGGAATTATCTGGAACATCCCCTGAACTGATCAACAAACTCATCCCAGAGCATGTCAGGCGGCAGACTGGTCTTGGCTTCCCATATCCCGGCTAG 876 0.4578 MDTDKEMSASVVDSNDAVTGHIISTTIGGKNGEPKRVRTISYMAERVVGTGSFGIVFQIFRGLAYIHTVPGVCHRDVKPQIFWLILSLTKLSFAILGVRKFWFKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQWTNLWKIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIGPCIEASSIFTKSSLQCCNWKHVHILSLMSFESPMPRLPNGRPLPPLFNFKQELSGTSPELINKLIPEHVRRQTGLGFPYPG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02780 291 Gene3D Transferase(Phosphotransferase) domain 1 53 280 - -
Mepo5g02780 291 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 5 58 - -
Mepo5g02780 291 Pfam Protein kinase domain 55 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02780 291 SUPERFAMILY Protein kinase-like (PK-like) 55 202 IPR011009 -
Mepo5g02780 291 ProSiteProfiles Protein kinase domain profile. 1 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02780 291 SMART serkin_6 21 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02780 Mepo-Chr5 33637433 33642081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02780 56 175 Core Cell Cycle Gene Families AT2G38620 42.975 7.29e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mepo5g02780 Pkinase 5.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02780 K14502 - cpap:110817622 328.561