Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02710 ATGGAAGCCCTTGCTGTTACAGTCTTGGAAAAGTTGAGTTCTGCAGCTTACAAAGAGCTTGAAATCATTTGGAATCTCAAAGATGATATCGAACGAATGAAGAACACAGTCTCCATGATAAAAGCTGTTCTCCTCGATGCAGAGGCCAAGGCCAATAATCATCAAGTGAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGATTTACTCGATGATTTTTCCGTTGAAAATTTGAGAAGTAAAGCGATGGCTGGAAACAACATAGTAAAACAGACACGATTTTTCTTCTCAAAATCAAACAAAGTAGCCTATGGTCTTAAAGTGGGCCATAAAATGAAAGAAATCCAAAAGAGGCTAGATGACATTGCTAAAACTAAGCATGCACTGCAGCTGAATGACCGCCCTATGGAGAATCCAATTGCATATAGGGAGCAGAGACAAACTTACTCATTTGTGAGTAAAGATGAAGTTATTGGAAGAGATGAGGAAACGAAATGTATTAAAAGTTATCTACTAGATGTCAATGCAACAGATAATGTTTCTATAATTCCAATAGTTGGGATTGGAGGATTAGGTAAGACTGCACTTGCTCAACTTGTCTACAATGATAATGATGTTCAAAGGTATTTTGAGCTAAAAATGTGGGTGTATGTCTCGGATGAATTTGATATAAAGAAAATATCTCGGGAGATCGTTGGGGATGAAAAGAATAGTCAGATGGAGCAAGTGCAACAACAACTTCGAAACAAAATAGAAGGGAAAAAGTTTTTGCTCGTGTTGGATGACATATGGAATGAGGATCGTGAGTTGTGGCTTAAATTGAAGAGCTTATTCATGGAAGGAGGAAAAGGAAGCATGGTAATCATTACAACGCGTAGTCAAACTGTGGCAAAAATAACAGGCACACATCCACCCCTTTTCTTAAAAGGTTTGGATTCACAAAAATCCCAGGAGCTATTCTCTCGAGTGGCTTTCAGCGAGTCGAAAGAACGAAATGATTTGGAGTTGTTAGCTATAGGAAGGGATATTGTTAAGAAATGTGCTGGCATTCCCCTTGCCATAAGAACTATTGGCAGCCTTTTGTTTTCTCGAAATTTGGGCCGGATTGATTGGCTATATTTCAAGGATGTTGAGTTTTCAAAGATAGATCAACACAAGGATAAAATCTTTGCAATCCTTAAACTGAGTTATGATCATCTTCCGTCGTTTCTGAAAAAATGTTTTGCTTATTGTTCATTGTTTCCTAAAGGTTTTGTGTTTGAAAAGAAAACACTCATTCAGTTATGGGCAGCCGAGGGGTTCATTCAATCATCAAATGATGTTAGGCGTGTAGAAGATGTTGGCCATGAGTACTTCATGAGTTTGCTGTCAATGTCCTTCTTTCAAGATATCGTTGTAGACGATTATGGTGACATTAGTAGTTGTAAAATGCATGACCTTATGCATGATCTAGCACAGCTAATGGTCGGGAATGAATATGTCATGGCTGAAGGAGAAGAAGCAAACATTGGAAACAAAACACGTTTTTTATCATCTCATAATGCATTACAGTTTGCACTGACATCATCATCTTCTTACAAGCTAAGGACATTTCTCTTATGCCCAAATACGAATGCAAGCAATTATCTGCGTCGGTCAAATGTTCTTTCCTTTTCAGGCCTAAAGTTCTTACGTGTGTTGACACTTTGTGGGTTGAATATTGTAGCAATCCCAAATAGTATTGAAGAGATGAAGCATCTGAGGTATATTGATCTATCAAAGAGTATTGGTCTTAAAGATCTTCCGCCGGGGATTACTAGCCTACAGAACCTTCAAACTCTAAAACTTTCTGATTGTTCCAAGCTCGATATATTACCAGAAAATCTCAACAAAAGTCTTAGGCATCTTGAGTTGAATGGTTGTGAGAGATTGAGATGTATGCCACAGGGGTTAGGACAGTTGACTAATCTTCAAACACTAACACTTTTTGTACTGAACAATAGAAGTACAAACATAAATGAGTTGGGTGAGTTAAACAACCTTAGAGGAAGATTAGAAATAAAAAGGTTGGATTTCCTGCGAAACGCTGCTGCAGAGATTGAATTTGTAAAAGTACTTCTTGAGAAGGAACACCTTCAACAATTGGAATTACGGTGGACATATGATGAAGAATTTATTGAGGATTTTCGTCAATGGCCATCATTGCCTAAAAGGGTCATACAAGAAAACAAAAACTGGTTGGAAGATGAGAAGATTTTAGAAGGCCTGCAGCCACACCACTCGCTTAAAAAACTAGTTATAGATGGGTTTTGCGGCAAAAAGTTACCAGACTGGATATGGAATCTCTCATCGCTCTTGACTCTTGAGTTCCACAATTGCAATGGTTTGACATCGCTGCCCGAAGCGATGTGTAACCTTGTATCTTTGCAGACACTTTGCATGTATAACTGCTCATTATTAGAGGAAAGATATGCAAAACCATATGGTCAAGACTGGCATAAAATCTCTCGCATCCGAAAAGTTGTGATCCTTCCTGTGAGACCATCATTACTCAAGTATTTTACTTGA 2559 0.3822 MEALAVTVLEKLSSAAYKELEIIWNLKDDIERMKNTVSMIKAVLLDAEAKANNHQVSNWLEELKDVLYDADDLLDDFSVENLRSKAMAGNNIVKQTRFFFSKSNKVAYGLKVGHKMKEIQKRLDDIAKTKHALQLNDRPMENPIAYREQRQTYSFVSKDEVIGRDEETKCIKSYLLDVNATDNVSIIPIVGIGGLGKTALAQLVYNDNDVQRYFELKMWVYVSDEFDIKKISREIVGDEKNSQMEQVQQQLRNKIEGKKFLLVLDDIWNEDRELWLKLKSLFMEGGKGSMVIITTRSQTVAKITGTHPPLFLKGLDSQKSQELFSRVAFSESKERNDLELLAIGRDIVKKCAGIPLAIRTIGSLLFSRNLGRIDWLYFKDVEFSKIDQHKDKIFAILKLSYDHLPSFLKKCFAYCSLFPKGFVFEKKTLIQLWAAEGFIQSSNDVRRVEDVGHEYFMSLLSMSFFQDIVVDDYGDISSCKMHDLMHDLAQLMVGNEYVMAEGEEANIGNKTRFLSSHNALQFALTSSSSYKLRTFLLCPNTNASNYLRRSNVLSFSGLKFLRVLTLCGLNIVAIPNSIEEMKHLRYIDLSKSIGLKDLPPGITSLQNLQTLKLSDCSKLDILPENLNKSLRHLELNGCERLRCMPQGLGQLTNLQTLTLFVLNNRSTNINELGELNNLRGRLEIKRLDFLRNAAAEIEFVKVLLEKEHLQQLELRWTYDEEFIEDFRQWPSLPKRVIQENKNWLEDEKILEGLQPHHSLKKLVIDGFCGKKLPDWIWNLSSLLTLEFHNCNGLTSLPEAMCNLVSLQTLCMYNCSLLEERYAKPYGQDWHKISRIRKVVILPVRPSLLKYFT 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02710 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 415 IPR027417 -
Mepo5g02710 852 Pfam NB-ARC domain 182 402 IPR002182 GO:0043531
Mepo5g02710 852 Pfam Rx N-terminal domain 7 92 IPR041118 -
Mepo5g02710 852 Gene3D - 314 400 IPR042197 -
Mepo5g02710 852 Coils Coil 116 136 - -
Mepo5g02710 852 Gene3D Ribonuclease Inhibitor 529 823 IPR032675 -
Mepo5g02710 852 Gene3D - 401 491 IPR036388 -
Mepo5g02710 852 FunFam Probable disease resistance protein At1g63360 401 491 - -
Mepo5g02710 852 FunFam Probable disease resistance protein At1g61300 145 309 - -
Mepo5g02710 852 SUPERFAMILY L domain-like 480 816 - -
Mepo5g02710 852 Gene3D - 146 307 IPR027417 -
Mepo5g02710 852 PRINTS Disease resistance protein signature 603 619 - -
Mepo5g02710 852 PRINTS Disease resistance protein signature 254 268 - -
Mepo5g02710 852 PRINTS Disease resistance protein signature 186 201 - -
Mepo5g02710 852 PRINTS Disease resistance protein signature 351 365 - -
Mepo5g02710 852 Gene3D - 6 130 - -
Mepo5g02710 852 PANTHER DISEASE RESISTANCE PROTEIN RP 41 810 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02710 Mepo-Chr5 32775886 32779605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02710 183 851 WRKY Transcription Factor Family AT5G45050 23.315 2.62e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02710 - - mtr:11424880 1151.35