Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02707 ATGGCACAGTTTCATGTTTTGGCTGTTGATGACAGTGTTATTGACAGAATGTTGATTGAAAGGCTTCTCAAAACCTCTTCATTTCATGTTACTGTGGTTGATTCTGGTACTAAGGCTTTGAAGTTTCTTGGTTTGGTTGAAGATGAGGTGAGGAATGAAAAGCCTCATTCTGTTGCTGCAGAAACAGATCAGGTTGTAGAAGTGAATCTGATCATAACTGATTACTGTATGCCAGGAATGACAGGCTATGATCTGCTGAGAAAGATCAAGGAATCTAATTCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCTGAAGAATTCTTTCTGAAACCAGTTCAACAATCTGATGTAAACAAGCTGAAACCACATTTGTTGAAGACAAAAGTTAAGAATGAAGATGACCAAATCAACAACAAAAGAAGGATACTTAACAATGCAATTCCATTGAAAAACTAG 504 0.373 MAQFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSVAAETDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKTKVKNEDDQINNKRRILNNAIPLKN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02707 167 SMART REC_2 4 140 IPR001789 GO:0000160
Mepo5g02707 167 SUPERFAMILY CheY-like 3 142 IPR011006 -
Mepo5g02707 167 ProSiteProfiles Response regulatory domain profile. 5 141 IPR001789 GO:0000160
Mepo5g02707 167 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 147 IPR045279 GO:0009736
Mepo5g02707 167 Pfam Response regulator receiver domain 6 133 IPR001789 GO:0000160
Mepo5g02707 167 Gene3D - 5 162 - -
Mepo5g02707 167 CDD REC_typeA_ARR 6 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02707 Mepo-Chr5 32744263 32746424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02707 2 164 Response Regulator Gene Family AT3G57040 65.455 8.32e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo5g02707 Response_reg 9.9e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02707 K14492 - gmx:100818762 256.529