Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02690 ATGAGTATGTTAGGTCTTAGAGACCTAGTTCTCATAGCTCCATCACCTTCTTCTCTTCAACATCATCATCAACAAAACCAAAACCAAAACCAAAACCAACCCATTTCACATGATCACAATTCAAACCACTCTTTACCTTCATCAGCTTCCTTAAGTGTTGGTTTTGGCATTTTTCCACTTCTCACTGCTACACCTTGCATGCCACAACAACAACAGCCTCAAAACAATGAAGTTCAAGAAAATCCTAGTAACAATAACAATTTTTGGAACCTTAGGATGTGTCCTGAAGTAGTGAATATTCCAAAAAAAGGAGTGATCACTGAAGAAGAGAATCATGGCAAAATGGCTATGATGGAAAATGAAGAGAATGGTGTGTATGGTTCTGAGTATAGAGTTTGTCAAGATTGTGGTAATAGGGCTAAGAAAGATTGTGTGTTTAGAAGATGTAGGACTTGTTGTAAGGGACGTGGTTATGATTGTAGTACTCATTTGAAGAGTACTTGGATTCCTTCGACACGTCGACGGGAACGGGAGGTGGAGATGTTTGCCGGTGGTGGTGGTGATGGTTGTTCTGGTGTTAAGAGACAAAAAGGTTTATTAGGGTCATCACAAAATGCTGCAGCTACTTCTCATAGCTCTAACTCTAATGGTACTACACCTAAGAGTTTTGCTACTAGCTCTTGTCACCAAGATGCAGGTTTCAAAGAGGGTTTACCAGGTCATGTTAATGCACCAGCTGTATTCAGGTGCCATAGAGTAACTGCTATTGGCAATGGTGAAGATGAATTTGCTTACTTGGCCACAGTTCATATTAGTGGCCATGTTTTCAAAGGGTTTCTCTATGATCATGGTGTTGATGGAAAAAATCCAATGCCTTGTGTTTCAGAACTTCAATTGGGAAATAATTGTAGTGGAAAAAATGGTGAATGTTCTTCTGCAATTGGTGTTCCAAACAATAATGCTTACCCTGCTTCTGCTAGCTAG 984 0.3984 MSMLGLRDLVLIAPSPSSLQHHHQQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQQPQNNEVQENPSNNNNFWNLRMCPEVVNIPKKGVITEEENHGKMAMMENEENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEMFAGGGGDGCSGVKRQKGLLGSSQNAAATSHSSNSNGTTPKSFATSSCHQDAGFKEGLPGHVNAPAVFRCHRVTAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKNPMPCVSELQLGNNCSGKNGECSSAIGVPNNNAYPASAS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02690 327 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 21 316 IPR007818 GO:0003700|GO:0006355
Mepo5g02690 327 MobiDBLite consensus disorder prediction 17 48 - -
Mepo5g02690 327 MobiDBLite consensus disorder prediction 201 224 - -
Mepo5g02690 327 Pfam Domain of unknown function (DUF702) 131 286 - -
Mepo5g02690 327 MobiDBLite consensus disorder prediction 66 85 - -
Mepo5g02690 327 NCBIfam putative zinc finger domain, LRP1 type 132 174 IPR006510 -
Mepo5g02690 327 NCBIfam LRP1 C-terminal domain 238 285 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02690 Mepo-Chr5 32547742 32553287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02690 1 322 C2H2 Transcription Factor Family AT5G12330 41.667 6.06e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mepo5g02690 DUF702 5.3e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02690 - - gmx:100806835 447.973