Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02654 ATGGCTACCGCAAGGACCGTTCAAGATGTTTCTCCACACGAGTTTGTCAAAGCTTACTCTGCTCATCTCAAAAGATCTGGCAAGATGGAGCTTCCAGAATGGACCGATATTGTTAAGACTGCAAGGTTTAAGGAGTTGGCTCCTTATGACCCTGACTGGTACTATGTCAGAGCTGCTTCCATTGCAAGGAAGATCTACTTGAGGGGAGGACTCGGTGTTGGTGCATTCCAGAGGATTTATGGTGGAAGCCAGAGGAATGGCAGTCGTCCACCTCATTTCTGCAAGAGCAGTGGTTCCATTGCTCGCCACATTCTTCAACAGTTGCAGAACATGAACCTTATTGAGATGGACACCAAGGGTGGCAGGAAGATCACTTCCAGTGGCAGGAGGGATTTGGACCAAGTTGCTGGACGTATTGTTATTGCTCCTTGA 432 0.4815 MATARTVQDVSPHEFVKAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASIARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNLIEMDTKGGRKITSSGRRDLDQVAGRIVIAP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02654 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Mepo5g02654 143 PANTHER 40S RIBOSOMAL PROTEIN S19 2 138 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mepo5g02654 143 FunFam 40S ribosomal protein S19 2 142 - -
Mepo5g02654 143 Gene3D - 1 142 IPR036388 -
Mepo5g02654 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mepo5g02654 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mepo5g02654 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 140 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02654 Mepo-Chr5 32205138 32207086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02654 1 142 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 83.099 8.59e-92 260