Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02646 ATGGCATCAATGTCAGCATCTGGTTCATGGAGTGCTAAGGACAATAAAGCATTTGAAAGGGCACTAGCTGTTTTTGATAAAGACACACCTGACCGTTGGTCCAATGTTGCTCAAGCTGTTGGTGGTGGGAAGACTCCTGAAGATGTTAAGAGACACTATGAACATCTCCTAAGGGATGTTAGGCACATTGAATCAGGTCAAGTTGCATTCCCAAATTACAAGAACATTGGAGTCTATGATGAGGAAAAAAGGTTGAGAAACTTAAAGCTCCAGTAA 276 0.4167 MASMSASGSWSAKDNKAFERALAVFDKDTPDRWSNVAQAVGGGKTPEDVKRHYEHLLRDVRHIESGQVAFPNYKNIGVYDEEKRLRNLKLQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02646 91 CDD SANT 9 57 IPR001005 -
Mepo5g02646 91 Gene3D - 2 70 - -
Mepo5g02646 91 ProSiteProfiles Myb-like domain profile. 8 57 IPR001005 -
Mepo5g02646 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 79 IPR044636 GO:0003700
Mepo5g02646 91 ProSiteProfiles SANT domain profile. 5 61 IPR017884 -
Mepo5g02646 91 SMART sant 6 59 IPR001005 -
Mepo5g02646 91 FunFam Transcription factor SRM1 2 70 - -
Mepo5g02646 91 SUPERFAMILY Homeodomain-like 8 65 IPR009057 -
Mepo5g02646 91 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02646 Mepo-Chr5 32112331 32113711 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g02646 Myb_DNA-binding 8.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02646 - - gmx:100804396 147.517