Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02622 ATGAAGAAGAAGCTTGATACCCGTTTTCCTGCTGCTCGAATAAAGAAGATAATGCAAGCGGATGAGGATGTTGGAAAGATAGCACTGGCAGTTCCTGTTTTAGTTTCAAAAGCTCTGGAATTATTTTTGCAAGATCTTTGTGACCGGACTTATGAAATAACTCTACAGAGAGGAGCAAAGACCATGAATGCATTGCATTTGAAACATTGTGTACAAAGCTACAACGTCTTTGACTTTTTGAGAGACATTGTCAGCAGGGTTCCTGACTATAGCCACGGACATGGCCATTCTGAGGCTGGGGCTGATGATCGTGCCGTTCCAAAGAGAAGGAAAGCTGCTGGTGATGATTGCAATGACAGCGATGAAGAGGCTAAGCGTAGTAAAATGCTTGAGTTGGGCCACACTGGCGGTACTGGTAGGGGAAGAGGAAGGGGTAGAGGAAGAGGCCGCGGTCGAGGGGCTCGAACTGCAGAAAGAGAAACCTTACATCAGCAGGTTGAATCTGAACCTTGCACTTCTATTCAGCAAAATACCAAAGACGTCCACAATACAAGTATGGCAATAGATAATGGTTCAGAATCAAAGGAGTTATCAAAGGAAAATATTGCAGCTCACGAAGAAAGTACTCAATCTCTCCGAAACATTGATCTGAATGCCAACTTGCATGAAAACGAGGACAAAAACAATACAAGCACGGACATACCTACTCAGGCCCCATTGCCTGAACCTGCTGCAACAACAGATATGCAACATGAAGAAATTCCAGGTTGGTCCCTTTCTGATGTCGACAAGATGGCGATTGACACGCTGCAGCTTGCAGCAAACCTTGGTAATAGGCTAGATGAGGATGAGGAAGATTATGATGAGGAGGAAGAGTAG 879 0.4471 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYSHGHGHSEAGADDRAVPKRRKAAGDDCNDSDEEAKRSKMLELGHTGGTGRGRGRGRGRGRGRGARTAERETLHQQVESEPCTSIQQNTKDVHNTSMAIDNGSESKELSKENIAAHEESTQSLRNIDLNANLHENEDKNNTSTDIPTQAPLPEPAATTDMQHEEIPGWSLSDVDKMAIDTLQLAANLGNRLDEDEEDYDEEEE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02622 292 MobiDBLite consensus disorder prediction 90 130 - -
Mepo5g02622 292 MobiDBLite consensus disorder prediction 223 252 - -
Mepo5g02622 292 SUPERFAMILY Histone-fold 3 99 IPR009072 GO:0046982
Mepo5g02622 292 MobiDBLite consensus disorder prediction 166 181 - -
Mepo5g02622 292 MobiDBLite consensus disorder prediction 90 181 - -
Mepo5g02622 292 MobiDBLite consensus disorder prediction 151 165 - -
Mepo5g02622 292 FunFam dr1-associated corepressor homolog 1 86 - -
Mepo5g02622 292 Coils Coil 273 292 - -
Mepo5g02622 292 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Mepo5g02622 292 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Mepo5g02622 292 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02622 Mepo-Chr5 31751112 31756022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02622 1 280 CCAAT-HAP5 Transcription Factor Family AT3G12480 52.027 2.00e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mepo5g02622 CBFD_NFYB_HMF 1.3e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02622 K21752 - gmx:100810093 409.068