Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02611 ATGCTCTATCACTGGTTACTTACCATCAAATTGATATGCTTTTTTTCCTTTGCTTATACACAACAACTTGAATATAGATATGCTTGTGTTGATAATTCTTCTATTCCTCCATCAAACACATACCTAAGAAATCTCAACAATTTGCTCTCAATACTATCATCAGATTCTGCTATCAGCAATGGTTTTGGACACACAACTTCAGGTAATGATCAAAACAATAAGGTTTATGGACTATACTTTTGTCGTGGCGATGCGAACACCGCCCTTTGTAAGTCATGTGTTCAATATTCTAGCAAATTGATTAAGCAGAAATGCCCTAATAATGCTTCTGCTATTTTTTGGTGCCCCTTTTGTCTTTTGAGATACTCAAACGTGAATTTCATTGGTAAATTAGCTATAAGACCAAGGATTCCTATGTTTGATTCAACACAAAATTTTACAAGTGCTGGTGAGTTTGATAGTGATGCTAGGATTTTGATGAATGGTTTGATACAAATGGGATCACAGACACCATTAATGTTTGGAACACATATGTTTAACATAAATGGTACTCAAAGAAGGTATGGTTGGGTGCAATGCAGCCGAGATATTACTAGTGAGGAATGCAGAACTTGTTTGAGTAATATGCTTGATGATGTTAAAAATTGTTGTATGGAGAAGCGAGTGTGGCGTATATTTTCGCCAAGTTGTGTTGTGATGTATGAAACTCAGCCATTCCTTTTGACGGGTACACAGCCTGACGCACCAGCGCATCAGAAAGAAAAGAAGAGCAAACAAAAGGATACGATTCTAATAATAATCATAGTTGTAACCGCAATGGTAGTAGCGCTATTGGCTTTCAGCACATTCTACTACAGGCGCTTGGAACGGAAAAAGGAGATGCAAATCCTCGACGCAATTTTTTCTCAAGACGAGACTAACAACGAGGAGAATGTGAATTCTGACCTACCTATGATGCCTCTGAGCACTATTCTAAAAAGTACTCATAATTTTTCTGATAAATATAAATTGGGGGAAGGTGGATTTGGAACTGTCTACAAGGGTGTTTTAGCAGATGGAAGGGAAATTGCTGTTAAAAGGCTTTCAAAAACATCGGTTCAAGGTGTTGAGGAATTCAAGAATGAAGTAATGTTGATAGCCAAATTGCAGCATCGGAACCTTGTGAGACTGTTAGCTTTCTGCATTGAGCAAAATGAAAAACTGCTTATCTATGAGTACATGCCTAATTCAAGCCTCAATTTTCAACTACGTGATTTGGTAAAGGGCGCGCAGTTGGATTGGAAACATCGATTAAACATTATTAATGGGATTGCTAAAGGGCTTCTCTATCTTCACGAGGACTCTAGACTCAGGGTTATTCATAGAGACTTGAAAGCTAGCAATATTTTGTTAGATCATGAAATGAATCCAAAAATTTCAGACTTTGGATTAGCTAGAACATTTGGAGGAGATCAAGGGGAATCAAATACAATGAGAGTTGTGGGAACATACGGATACATGGCTCCAGAATATGCTATTGAAGGCTTGTTTTCAGTGAAGTCAGATGTTTTCAGCTTTGGTGTTCTTTTGCTAGAGATCATCAGTGGAAAAAGGAACAACAGATTCTATCTTTCAGAGCATGGCCAAAGCCTTCTCACATATGCATGGAACTTCTGGAGTGAAGGAAAAGGTTTAGAATTGATGGATCCATTGATAGCAAATTCATTTGTGCCTAGTGAAGTTTTGAAGTGTATACACATTGGCCTATTGTGTGTACAAGATAACGCAGCTGATAGGCCTACAATGTCAGGTGTTGTTCACATGCTTGGAAGTGACAATATTACTCTTCCCAACCCCATATGTCCATCTTTTTCTGTTGGAAGGTCTACAAATACAATTGAAGGAGGGTCTTCATCAAACGCTTCTACCTCTGTCACTGTCAATGAAATAACCCTATCCGAAGTGTTGCCTAGATGA 1956 0.3819 MLYHWLLTIKLICFFSFAYTQQLEYRYACVDNSSIPPSNTYLRNLNNLLSILSSDSAISNGFGHTTSGNDQNNKVYGLYFCRGDANTALCKSCVQYSSKLIKQKCPNNASAIFWCPFCLLRYSNVNFIGKLAIRPRIPMFDSTQNFTSAGEFDSDARILMNGLIQMGSQTPLMFGTHMFNINGTQRRYGWVQCSRDITSEECRTCLSNMLDDVKNCCMEKRVWRIFSPSCVVMYETQPFLLTGTQPDAPAHQKEKKSKQKDTILIIIIVVTAMVVALLAFSTFYYRRLERKKEMQILDAIFSQDETNNEENVNSDLPMMPLSTILKSTHNFSDKYKLGEGGFGTVYKGVLADGREIAVKRLSKTSVQGVEEFKNEVMLIAKLQHRNLVRLLAFCIEQNEKLLIYEYMPNSSLNFQLRDLVKGAQLDWKHRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARTFGGDQGESNTMRVVGTYGYMAPEYAIEGLFSVKSDVFSFGVLLLEIISGKRNNRFYLSEHGQSLLTYAWNFWSEGKGLELMDPLIANSFVPSEVLKCIHIGLLCVQDNAADRPTMSGVVHMLGSDNITLPNPICPSFSVGRSTNTIEGGSSSNASTSVTVNEITLSEVLPR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02611 651 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 645 - -
Mepo5g02611 651 Pfam Protein tyrosine and serine/threonine kinase 335 601 IPR001245 GO:0004672|GO:0006468
Mepo5g02611 651 SMART serkin_6 331 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02611 651 ProSiteProfiles Protein kinase domain profile. 331 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02611 651 Gene3D Phosphorylase Kinase; domain 1 292 406 - -
Mepo5g02611 651 FunFam Cysteine-rich receptor-like protein kinase 28 25 126 - -
Mepo5g02611 651 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Mepo5g02611 651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 296 406 - -
Mepo5g02611 651 Gene3D Transferase(Phosphotransferase) domain 1 407 608 - -
Mepo5g02611 651 SUPERFAMILY Protein kinase-like (PK-like) 313 602 IPR011009 -
Mepo5g02611 651 FunFam Cysteine-rich receptor-like protein kinase 10 137 239 - -
Mepo5g02611 651 Gene3D - 22 127 IPR038408 -
Mepo5g02611 651 Gene3D - 137 239 IPR038408 -
Mepo5g02611 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Mepo5g02611 651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 407 610 - -
Mepo5g02611 651 ProSiteProfiles Gnk2-homologous domain profile. 23 127 IPR002902 -
Mepo5g02611 651 ProSiteProfiles Gnk2-homologous domain profile. 134 239 IPR002902 -
Mepo5g02611 651 Pfam Salt stress response/antifungal 144 236 IPR002902 -
Mepo5g02611 651 Pfam Salt stress response/antifungal 34 124 IPR002902 -
Mepo5g02611 651 CDD STKc_IRAK 337 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02611 Mepo-Chr5 31657825 31662297 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02611 27 651 Receptor kinase-like Gene Family AT4G05200 39.385 7.76e-167 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo5g02611 PK_Tyr_Ser-Thr 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02611 - - gmx:100798691 937.947