Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02608 ATGCTTCATCTATGGTTATTTACCATCACATTGATATACCTTTTCTATGTTGCTGTAGGCCAAAACAATAGCAATTCACAAGAACTACTTGAATATAGATATGCTTGTTTGGACCAATCTTCTACTCCTCCCTCTACCACATACCAAACCAACCTCAACAATTTAATCTCTTCGCTATCATCAGATTCTGCTTCCAGCAATGGTTTTGGAAATAGTACTTCAGGTAGTAATCAAAACATGGTTTATGGACAATACCTTTGTCGTGGCGATGTTAATACAAGTCTTTGTCATTCATGTGTCCAAAACTCTAGCAGATTGCTCAAACAACACTGTCCAAATAATGCATCAGCAATTTTGTGGTACCCTTTTTGTCTTCTAAGGTACTCAAATCAGAATTTCTTTGGTAACCTTACTATAAGACCAAGGATTCCTATGTTTGATGTAGCACAAAATTTAACCAGTGCTGGTGAATTTGATAGTGATGCTAGGGTTTTGATGAATGGTTTGATACAAATGGGATCACAAACACCTTTAATGTTTGGAACGCATATGTTCAACATAAATGGTACTCAAAGAAGGTATGGTTGGGTACAGTGTAGCAGAGATATTACTAGTGAGGAATGCAGAACTTGTTTGAGCAATATGCTTGAGGATGTTGAAAATTGTTGTATGGAGAAGAAAGTGTGGAGAATCTTTTCTCCAAGTTGTATTGTCATGTATGAAACCCAGCCATTCTTTGTGAATGGTACAGTTTCTGAAGCTCCTGTGCCTCAACAAGCTAATGAAAAGGATGGCACAAGGTCATGGATAATAATAATCATTGTTGTAATTGGAGCAGTAGTAGCAGCTCTAGTGGTTTTCAGCACATACTATTTCTGGTGCTTGAAACATCGAAAAAGGAGAAATGTTATGCAAAGCCATAGTAAAATATTTTCTCAATATCAGACTGACATTGAGGAGACTGGAAACACTGACCTACCTATGATGCCTCTGAGTACTATTCTAAAAAGCACTAATAATTTTTGTGATGAATATAAATTAGGGAAAGGTGGATTTGGAACTGTCTACAAGGGTGTTCTAGCAGATGAAAGGGAAATTGCTGTTAAAAGGCTTTCAACAACTTCTTTTCAAGGTGTGGAGGAATTAAAAAATGAAATAATATTGATTGCCAAATTGCAACACCGAAACCTTGTCAGACTATTGGCCTGCTGCATTGAGCAAAATGAAAAGCTTCTTATCTATGAATACTTGCCTAATTCAAGCCTTGATTTCCACCTATTTGATATGGTGAAGGGTGCACAACTAGATTGGAGACAGAGATTAAATATTATTAATGGGATTGCTAAAGGGCTTCTATATCTTCATGAGGACTCTAGGCTCAGAGTTATTCACAGAGACCTGAAAGCTAGCAATATTCTATTAGATCAAGAAATGAATCCAAAAATCTCAGATTTTGGACTGGCAAGAACATTTGGAGGAGACCAAGATGAAGCAAATACAATCAGAGTTGTGGGAACTTAG 1521 0.3682 MLHLWLFTITLIYLFYVAVGQNNSNSQELLEYRYACLDQSSTPPSTTYQTNLNNLISSLSSDSASSNGFGNSTSGSNQNMVYGQYLCRGDVNTSLCHSCVQNSSRLLKQHCPNNASAILWYPFCLLRYSNQNFFGNLTIRPRIPMFDVAQNLTSAGEFDSDARVLMNGLIQMGSQTPLMFGTHMFNINGTQRRYGWVQCSRDITSEECRTCLSNMLEDVENCCMEKKVWRIFSPSCIVMYETQPFFVNGTVSEAPVPQQANEKDGTRSWIIIIIVVIGAVVAALVVFSTYYFWCLKHRKRRNVMQSHSKIFSQYQTDIEETGNTDLPMMPLSTILKSTNNFCDEYKLGKGGFGTVYKGVLADEREIAVKRLSTTSFQGVEELKNEIILIAKLQHRNLVRLLACCIEQNEKLLIYEYLPNSSLDFHLFDMVKGAQLDWRQRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDQEMNPKISDFGLARTFGGDQDEANTIRVVGT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02608 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mepo5g02608 506 FunFam Cysteine-rich receptor-like protein kinase 28 32 132 - -
Mepo5g02608 506 FunFam Cysteine-rich receptor-like protein kinase 10 144 245 - -
Mepo5g02608 506 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Mepo5g02608 506 SUPERFAMILY Protein kinase-like (PK-like) 323 506 IPR011009 -
Mepo5g02608 506 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 506 - -
Mepo5g02608 506 SMART serkin_6 341 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02608 506 Gene3D Phosphorylase Kinase; domain 1 300 416 - -
Mepo5g02608 506 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Mepo5g02608 506 Gene3D Transferase(Phosphotransferase) domain 1 417 506 - -
Mepo5g02608 506 Pfam Protein kinase domain 344 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02608 506 Gene3D - 145 245 IPR038408 -
Mepo5g02608 506 Gene3D - 30 133 IPR038408 -
Mepo5g02608 506 Pfam Salt stress response/antifungal 151 242 IPR002902 -
Mepo5g02608 506 Pfam Salt stress response/antifungal 41 131 IPR002902 -
Mepo5g02608 506 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Mepo5g02608 506 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 417 506 - -
Mepo5g02608 506 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 416 - -
Mepo5g02608 506 ProSiteProfiles Protein kinase domain profile. 341 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02608 Mepo-Chr5 31637809 31641286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02608 34 506 Receptor kinase-like Gene Family AT4G05200 39.634 2.55e-117 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo5g02608 Pkinase 3.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02608 - - gmx:100798691 780.4